Pre_GI: BLASTN Hits

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Query: NC_011769:2016000 Desulfovibrio vulgaris str. 'Miyazaki F', complete genome

Start: 2016000, End: 2048599, Length: 32600

Host Lineage: Desulfovibrio vulgaris; Desulfovibrio; Desulfovibrionaceae; Desulfovibrionales; Proteobacteria; Bacteria

General Information: Desulfovibrio vulgaris str. 'Miyazaki F' has one of the best characterized nickel/iron hydrogenases. A sulfate reducing bacterium. These organisms typically grow anaerobically, although some can tolerate oxygen, and they utilize a wide variety of electron acceptors, including sulfate, sulfur, nitrate, and nitrite. A number of toxic metals are reduced, including uranium (VI), chromium (VI) and iron (III), making these organisms of interest as bioremediators. Metal corrosion, a problem that is partly the result of the collective activity of these bacteria, produces billions of dollars in losses each year to the petroleum industry. These organisms are also responsible for the production of poisonous hydrogen sulfide gas in marine sediments and in terrestrial environments such as drilling sites for petroleum products. This species is a sulfate reducer commonly found in a variety of soil and aquatic environments.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_002937:1764117*1764117182574661630Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete1e-64256BLASTN svgBLASTP svg
NC_002937:1578213*1578213160422926017Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete2e-60242BLASTN svgBLASTP svg
NC_008751:10432691043269108607442806Desulfovibrio vulgaris subsp. vulgaris DP4, complete genome9e-41176BLASTN svgBLASTP svg
NC_002937:22637632263763229216828406Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete8e-32147BLASTN svgBLASTP svg
NC_014365:28431262843126287814035015Desulfarculus baarsii DSM 2075 chromosome, complete genome8e-26127BLASTN svgBLASTP svg
NC_002937:2068117*2068117214464576529Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete7e-1487.7BLASTN svgBLASTP svg
NC_002937:1548081*1548081157450726427Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete2e-1179.8BLASTN svgBLASTP svg
NC_008751:29882352988235301490126667Desulfovibrio vulgaris subsp. vulgaris DP4, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_011894:7421867*7421867744558723721Methylobacterium nodulans ORS 2060, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_014006:12045001204500122366719168Sphingobium japonicum UT26S chromosome 1, complete genome4e-0661.9BLASTN svgBLASTP svg