Pre_GI: BLASTN Hits

Some Help

Query: NC_010612:4654936 Mycobacterium marinum M, complete genome

Start: 4654936, End: 4673126, Length: 18191

Host Lineage: Mycobacterium marinum; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium marinum is commonly found in fresh and salt water in North America. This bacterium, a close relative of M. tuberculosis, causes a tuberculosis-like disease in frogs, fish and other cold-blooded animals, and a peripheral granulomatous disease in humans. Human infections can be persistent and may lead to systemic infection and arthritis. M. marinum is photochromogenic, i.e. it produces bright yellow pigmentation (mainly beta-carotene) upon exposure to visible light. Infection is followed by a 2-8 week incubation period resulting in suppuration (pus) and organized ulcerating granulomas (tumorous lesions), predominantly localized in lymphatic and tendon sheaths, and cooler body tissues in the extremities.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010612:90890*9089011475023861Mycobacterium marinum M, complete genome3e-21111BLASTN svgBLASTP svg
NC_010612:103081*10308113565632576Mycobacterium marinum M, complete genome3e-21111BLASTN svgBLASTP svg
NC_015145:26937492693749273661842870Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genome6e-1693.7BLASTN svgBLASTP svg
NC_014666:18448821844882186336118480Frankia sp. EuI1c chromosome, complete genome9e-1279.8BLASTN svgBLASTP svg
NC_014666:1601972*1601972162651924548Frankia sp. EuI1c chromosome, complete genome9e-1279.8BLASTN svgBLASTP svg
NC_010612:3745332*3745332378131835987Mycobacterium marinum M, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_002944:23738732373873239934625474Mycobacterium avium subsp. paratuberculosis K-10, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_002944:18814051881405190464023236Mycobacterium avium subsp. paratuberculosis K-10, complete genome6e-1073.8BLASTN svgBLASTP svg
NC_019673:526000*52600056212836129Saccharothrix espanaensis DSM 44229 complete genome9e-0969.9BLASTN svgBLASTP svg
NC_008596:421882*42188246586743986Mycobacterium smegmatis str. MC2 155, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_013172:2647716*2647716267284725132Brachybacterium faecium DSM 4810, complete genome3e-0867.9BLASTN svgBLASTP svg
NC_020133:2886541*2886541291380027260Mycobacterium liflandii 128FXT, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_006087:23261432326143235421928077Leifsonia xyli subsp. xyli str. CTCB07, complete genome1e-0765.9BLASTN svgBLASTP svg
NC_010545:11950*119506085348904Corynebacterium urealyticum DSM 7109, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_008537:12500125003067618177Arthrobacter sp. FB24 plasmid 1, complete sequence5e-0763.9BLASTN svgBLASTP svg
NC_015957:98018849801884982418222299Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_014659:10065001006500103066624167Rhodococcus equi 103S, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_010612:3969244*3969244401404344800Mycobacterium marinum M, complete genome8e-0660BLASTN svgBLASTP svg
NC_002944:12854361285436132132435889Mycobacterium avium subsp. paratuberculosis K-10, complete genome8e-0660BLASTN svgBLASTP svg