Pre_GI: BLASTN Hits

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Query: NC_010475:420978 Synechococcus sp. PCC 7002, complete genome

Start: 420978, End: 450099, Length: 29122

Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria

General Information: The cyanobacterium Synechococcus sp. PCC 7002 (formerly known as Agmenellum quadruplicatum strain PR-6) was originally isolated in 1961 by Chase Van Baalen from an onshore, marine mud flat sample derived from fish pens on Maguyes Island, La Parguera, Puerto Rico. The organism grows in brackish (euryhaline/marine) water and is unicellular but tends to form short filaments of two to four cells during exponential growth at the temperature optimum of 38 degrees C. The strain is extremely tolerant of high light intensities and has been grown at light intensities equivalent to two suns. This unique combination of physiological and genetic properties have long made this strain an important model system to studies of the oxygenic photosynthetic apparatus, the regulation of carbon and nitrogen metabolism, and other aspects of cyanobacterial physiology and metabolism.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_000911:35226335226339172939467Synechocystis sp. PCC 6803, complete genome8e-38167BLASTN svgBLASTP svg
NC_010546:47860004786000480938923390Cyanothece sp. ATCC 51142 chromosome circular, complete sequence1e-33153BLASTN svgBLASTP svg
NC_000911:1611500*1611500164476733268Synechocystis sp. PCC 6803, complete genome1e-30143BLASTN svgBLASTP svg
NC_002939:1634843*1634843166966434822Geobacter sulfurreducens PCA, complete genome3e-19105BLASTN svgBLASTP svg
NC_000911:34780003478000349877120772Synechocystis sp. PCC 6803, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_005070:2308363*2308363233088122519Synechococcus sp. WH 8102, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_002516:1031386*1031386109196460579Pseudomonas aeruginosa PAO1, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_015510:36416763641676366786126186Haliscomenobacter hydrossis DSM 1100 chromosome, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_016025:807226*80722682979722572Candidatus Chloracidobacterium thermophilum B chromosome chromosome9e-1383.8BLASTN svgBLASTP svg
NC_009712:18223751822375185409931725Candidatus Methanoregula boonei 6A8, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_004129:5481629*5481629550572324095Pseudomonas fluorescens Pf-5, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_007516:2383097*2383097240925926163Synechococcus sp. CC9605, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_008463:4566976*4566976460307636101Pseudomonas aeruginosa UCBPP-PA14, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_008609:22543922254392227958425193Pelobacter propionicus DSM 2379, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_011770:4763506*4763506478993126426Pseudomonas aeruginosa LESB58, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_011884:1541256*1541256157031329058Cyanothece sp. PCC 7425, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_007759:23154902315490233759922110Syntrophus aciditrophicus SB, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_007516:24202642420264244528825025Synechococcus sp. CC9605, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_004113:11377541137754116109023337Thermosynechococcus elongatus BP-1, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_008312:3638104*3638104366309924996Trichodesmium erythraeum IMS101, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009348:3029963*3029963306659936637Aeromonas salmonicida subsp. salmonicida A449, complete genome9e-1073.8BLASTN svgBLASTP svg
NC_003911:1791878*1791878185265460777Silicibacter pomeroyi DSS-3, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_010296:2200054*2200054221987519822Microcystis aeruginosa NIES-843, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015737:879545*87954590287223328Clostridium sp. SY8519, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_007644:1694879*1694879171885823980Moorella thermoacetica ATCC 39073, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_011884:5019500*5019500505991140412Cyanothece sp. PCC 7425, complete genome9e-0763.9BLASTN svgBLASTP svg