Query: NC_010475:420978 Synechococcus sp. PCC 7002, complete genome
Start: 420978, End: 450099, Length: 29122
Host Lineage: Synechococcus; Synechococcus; Synechococcaceae; Chroococcales; Cyanobacteria; Bacteria
General Information: The cyanobacterium Synechococcus sp. PCC 7002 (formerly known as Agmenellum quadruplicatum strain PR-6) was originally isolated in 1961 by Chase Van Baalen from an onshore, marine mud flat sample derived from fish pens on Maguyes Island, La Parguera, Puerto Rico. The organism grows in brackish (euryhaline/marine) water and is unicellular but tends to form short filaments of two to four cells during exponential growth at the temperature optimum of 38 degrees C. The strain is extremely tolerant of high light intensities and has been grown at light intensities equivalent to two suns. This unique combination of physiological and genetic properties have long made this strain an important model system to studies of the oxygenic photosynthetic apparatus, the regulation of carbon and nitrogen metabolism, and other aspects of cyanobacterial physiology and metabolism.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_000911:352263 | 352263 | 391729 | 39467 | Synechocystis sp. PCC 6803, complete genome | 8e-38 | 167 | BLASTN svg | BLASTP svg |
| NC_010546:4786000 | 4786000 | 4809389 | 23390 | Cyanothece sp. ATCC 51142 chromosome circular, complete sequence | 1e-33 | 153 | BLASTN svg | BLASTP svg |
| NC_000911:1611500* | 1611500 | 1644767 | 33268 | Synechocystis sp. PCC 6803, complete genome | 1e-30 | 143 | BLASTN svg | BLASTP svg |
| NC_002939:1634843* | 1634843 | 1669664 | 34822 | Geobacter sulfurreducens PCA, complete genome | 3e-19 | 105 | BLASTN svg | BLASTP svg |
| NC_000911:3478000 | 3478000 | 3498771 | 20772 | Synechocystis sp. PCC 6803, complete genome | 2e-17 | 99.6 | BLASTN svg | BLASTP svg |
| NC_005070:2308363* | 2308363 | 2330881 | 22519 | Synechococcus sp. WH 8102, complete genome | 6e-17 | 97.6 | BLASTN svg | BLASTP svg |
| NC_002516:1031386* | 1031386 | 1091964 | 60579 | Pseudomonas aeruginosa PAO1, complete genome | 2e-14 | 89.7 | BLASTN svg | BLASTP svg |
| NC_015510:3641676 | 3641676 | 3667861 | 26186 | Haliscomenobacter hydrossis DSM 1100 chromosome, complete genome | 6e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_016025:807226* | 807226 | 829797 | 22572 | Candidatus Chloracidobacterium thermophilum B chromosome chromosome | 9e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_009712:1822375 | 1822375 | 1854099 | 31725 | Candidatus Methanoregula boonei 6A8, complete genome | 9e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_004129:5481629* | 5481629 | 5505723 | 24095 | Pseudomonas fluorescens Pf-5, complete genome | 4e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_007516:2383097* | 2383097 | 2409259 | 26163 | Synechococcus sp. CC9605, complete genome | 4e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_008463:4566976* | 4566976 | 4603076 | 36101 | Pseudomonas aeruginosa UCBPP-PA14, complete genome | 4e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_008609:2254392 | 2254392 | 2279584 | 25193 | Pelobacter propionicus DSM 2379, complete genome | 4e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_011770:4763506* | 4763506 | 4789931 | 26426 | Pseudomonas aeruginosa LESB58, complete genome | 4e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_011884:1541256* | 1541256 | 1570313 | 29058 | Cyanothece sp. PCC 7425, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_007759:2315490 | 2315490 | 2337599 | 22110 | Syntrophus aciditrophicus SB, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_007516:2420264 | 2420264 | 2445288 | 25025 | Synechococcus sp. CC9605, complete genome | 6e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_004113:1137754 | 1137754 | 1161090 | 23337 | Thermosynechococcus elongatus BP-1, complete genome | 6e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_008312:3638104* | 3638104 | 3663099 | 24996 | Trichodesmium erythraeum IMS101, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
| NC_009348:3029963* | 3029963 | 3066599 | 36637 | Aeromonas salmonicida subsp. salmonicida A449, complete genome | 9e-10 | 73.8 | BLASTN svg | BLASTP svg |
| NC_003911:1791878* | 1791878 | 1852654 | 60777 | Silicibacter pomeroyi DSS-3, complete genome | 4e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_010296:2200054* | 2200054 | 2219875 | 19822 | Microcystis aeruginosa NIES-843, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_015737:879545* | 879545 | 902872 | 23328 | Clostridium sp. SY8519, complete genome | 6e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_007644:1694879* | 1694879 | 1718858 | 23980 | Moorella thermoacetica ATCC 39073, complete genome | 6e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_011884:5019500* | 5019500 | 5059911 | 40412 | Cyanothece sp. PCC 7425, complete genome | 9e-07 | 63.9 | BLASTN svg | BLASTP svg |