Pre_GI: BLASTN Hits

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Query: NC_010334:2090990 Shewanella halifaxensis HAW-EB4, complete genome

Start: 2090990, End: 2114099, Length: 23110

Host Lineage: Shewanella halifaxensis; Shewanella; Shewanellaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment in a munitions-dumping area of the Emerald Basin (depth of 215 m, Atlantic Ocean), offshore of Halifax Harbour (Nova Scotia, Canada). It is capable of efficiently degrading RDX (hexahydro-1,3,5-trinitro-1,3,5-triazine), an explosive compound that contaminates the environment. This bacterium is an obligate respiratory organism.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010334:15616911561691159069529005Shewanella halifaxensis HAW-EB4, complete genome6e-35157BLASTN svgBLASTP svg
NC_004349:393839382609922162Shewanella oneidensis MR-1 plasmid pMR-1, complete sequence1e-0869.9BLASTN svgBLASTP svg
NC_004347:40078474007847403509927253Shewanella oneidensis MR-1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009784:12317911231791125420022410Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence4e-0867.9BLASTN svgBLASTP svg
NC_011138:10058721005872102609920228Alteromonas macleodii 'Deep ecotype', complete genome3e-0661.9BLASTN svgBLASTP svg