Pre_GI: BLASTN Hits

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Query: NC_010162:9207000 Sorangium cellulosum 'So ce 56', complete genome

Start: 9207000, End: 9233168, Length: 26169

Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria

General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010162:8585856*8585856860409918244Sorangium cellulosum 'So ce 56', complete genome05277BLASTN svgBLASTP svg
NC_010162:12652197126521971267209919903Sorangium cellulosum 'So ce 56', complete genome05277BLASTN svgBLASTP svg
NC_010162:78248787824878785192027043Sorangium cellulosum 'So ce 56', complete genome04666BLASTN svgBLASTP svg
NC_010162:85281168528116855329725182Sorangium cellulosum 'So ce 56', complete genome04185BLASTN svgBLASTP svg
NC_010162:87601288760128878109920972Sorangium cellulosum 'So ce 56', complete genome03279BLASTN svgBLASTP svg
NC_015711:81697528169752821033740586Myxococcus fulvus HW-1 chromosome, complete genome2e-47198BLASTN svgBLASTP svg
NC_008095:4189082*4189082423409745016Myxococcus xanthus DK 1622, complete genome2e-29139BLASTN svgBLASTP svg
NC_008095:24200662420066243911019045Myxococcus xanthus DK 1622, complete genome2e-29139BLASTN svgBLASTP svg
NC_010162:11766000117660001179023424235Sorangium cellulosum 'So ce 56', complete genome2e-25125BLASTN svgBLASTP svg
NC_010162:10764788*107647881078955024763Sorangium cellulosum 'So ce 56', complete genome1e-24123BLASTN svgBLASTP svg