Pre_GI: BLASTN Hits

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Query: NC_010162:2717741 Sorangium cellulosum 'So ce 56', complete genome

Start: 2717741, End: 2742749, Length: 25009

Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria

General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013720:16052401605240163223826999Pirellula staleyi DSM 6068, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_009076:3876733*3876733389976123029Burkholderia pseudomallei 1106a chromosome I, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_007517:35247153524715355369128977Geobacter metallireducens GS-15, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007434:111607*11160713392422318Burkholderia pseudomallei 1710b chromosome I, complete sequence5e-0867.9BLASTN svgBLASTP svg
NC_008025:1998500*1998500202271224213Deinococcus geothermalis DSM 11300, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007516:2383097*2383097240925926163Synechococcus sp. CC9605, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011769:24720224720227380526604Desulfovibrio vulgaris str. 'Miyazaki F', complete genome3e-0661.9BLASTN svgBLASTP svg
NC_013922:331847*33184739351061664Natrialba magadii ATCC 43099 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_020302:21164682116468213885522388Corynebacterium halotolerans YIM 70093 = DSM 44683, complete3e-0661.9BLASTN svgBLASTP svg
NC_019940:18378631837863186010522243Thioflavicoccus mobilis 8321 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_005070:2308363*2308363233088122519Synechococcus sp. WH 8102, complete genome3e-0661.9BLASTN svgBLASTP svg