Pre_GI: BLASTN Hits

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Query: NC_010162:1222000 Sorangium cellulosum 'So ce 56', complete genome

Start: 1222000, End: 1245525, Length: 23526

Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria

General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007760:49111814911181493806026880Anaeromyxobacter dehalogenans 2CP-C, complete genome1e-33153BLASTN svgBLASTP svg
NC_014623:41405654140565415991219348Stigmatella aurantiaca DW4/3-1 chromosome, complete genome3e-21111BLASTN svgBLASTP svg
NC_011145:49609404960940498025219313Anaeromyxobacter sp. K, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_013204:79985779985782512625270Eggerthella lenta DSM 2243, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_008254:53459053459055841423825Mesorhizobium sp. BNC1, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_013595:71090397109039714185932821Streptosporangium roseum DSM 43021, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010572:12937861293786131684623061Streptomyces griseus subsp. griseus NBRC 13350, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_021177:71596547159654718278823135Streptomyces fulvissimus DSM 40593, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_018750:69506956950695697113120437Streptomyces venezuelae ATCC 10712, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_003078:67100067100071995348954Sinorhizobium meliloti 1021 plasmid pSymB, complete sequence4e-0867.9BLASTN svgBLASTP svg
NC_008010:1*11765917659Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence7e-0763.9BLASTN svgBLASTP svg