Pre_GI: BLASTN Hits

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Query: NC_010001:3895264 Clostridium phytofermentans ISDg, complete genome

Start: 3895264, End: 3917145, Length: 21882

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015275:65495965495967416419206Clostridium lentocellum DSM 5427 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015474:723553*72355378401560463Pyrococcus sp. NA2 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010003:903433*90343392613222700Petrotoga mobilis SJ95, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014614:6115*61154920643092Clostridium sticklandii, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015687:2632557*2632557266659934043Clostridium acetobutylicum DSM 1731 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg