Pre_GI: BLASTN Hits

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Query: NC_010001:1806000 Clostridium phytofermentans ISDg, complete genome

Start: 1806000, End: 1823599, Length: 17600

Host Lineage: Lachnoclostridium phytofermentans; Lachnoclostridium; Lachnospiraceae; Clostridiales; Firmicutes; Bacteria

General Information: Isolated from forest soil near the Quabbin Reservoir in Massachusetts, USA. This organism plays an important industrial and ecological role in the anaerobic fermentation of cellulose and produces economically significant levels of acetate and ethanol. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014828:20386922038692208731548624Ethanoligenens harbinense YUAN-3 chromosome, complete genome0880BLASTN svgBLASTP svg
NC_018664:26381022638102265775819657Clostridium acidurici 9a chromosome, complete genome8e-0969.9BLASTN svgBLASTP svg
NC_010674:11702641170264119243322170Clostridium botulinum B str. Eklund 17B, complete genome5e-0763.9BLASTN svgBLASTP svg
NC_015474:10358341035834105891923086Pyrococcus sp. NA2 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_013791:11525001152500117335420855Bacillus pseudofirmus OF4 chromosome, complete genome2e-0661.9BLASTN svgBLASTP svg