Pre_GI: BLASTN Hits

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Query: NC_009656:5185704 Pseudomonas aeruginosa PA7 chromosome, complete genome

Start: 5185704, End: 5208219, Length: 22516

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Non-respiratory clinical isolate from Argentina. Opportunistic pathogen. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_005773:56366065636606566314526540Pseudomonas syringae pv. phaseolicola 1448A, complete genome8e-25123BLASTN svgBLASTP svg
NC_011027:303000*30300033016127162Chlorobaculum parvum NCIB 8327, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_012559:18880001888000191471626717Laribacter hongkongensis HLHK9, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014500:89413689413693546441329Dickeya dadantii 3937 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_015677:3520524*3520524354474924226Ramlibacter tataouinensis TTB310 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012559:2854640*2854640288043025791Laribacter hongkongensis HLHK9, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_002932:1798869*1798869182453825670Chlorobium tepidum TLS, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_003155:74539947453994748164227649Streptomyces avermitilis MA-4680, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007645:68584656858465688089522431Hahella chejuensis KCTC 2396, complete genome3e-0661.9BLASTN svgBLASTP svg