Pre_GI: BLASTN Hits

Some Help

Query: NC_009614:4802000 Bacteroides vulgatus ATCC 8482 chromosome, complete genome

Start: 4802000, End: 4825714, Length: 23715

Host Lineage: Bacteroides vulgatus; Bacteroides; Bacteroidaceae; Bacteroidales; Bacteroidetes; Bacteria

General Information: Normal gastrointestinal bacterium. This group of microbes constitute the most abundant members of the intestinal microflora of mammals. Typically they are symbionts, but they can become opportunistic pathogens in the peritoneal (intra-abdominal) cavity. Breakdown of complex plant polysaccharides such as cellulose and hemicellulose and host-derived polysaccharides such as mucopolysaccharides is aided by the many enzymes these organisms produce. Bacteroides vulgatus and Bacteroides thetaiotaomicron are the the most common fecal isolates from humans and other animals. Comparison of Bacteroides vulgatus with other Bacteroides species will provide information on their ability to colonize and exploit the intestinal environment.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015160:4285542*4285542433244746906Odoribacter splanchnicus DSM 20712 chromosome, complete genome01705BLASTN svgBLASTP svg
NC_015160:26646132664613268809923487Odoribacter splanchnicus DSM 20712 chromosome, complete genome01703BLASTN svgBLASTP svg
NC_015160:2239933*2239933226807928147Odoribacter splanchnicus DSM 20712 chromosome, complete genome01699BLASTN svgBLASTP svg
NC_015160:11173711117371113567618306Odoribacter splanchnicus DSM 20712 chromosome, complete genome01687BLASTN svgBLASTP svg
NC_015160:21459152145915216719121277Odoribacter splanchnicus DSM 20712 chromosome, complete genome01649BLASTN svgBLASTP svg
NC_015160:797780*79778082609928320Odoribacter splanchnicus DSM 20712 chromosome, complete genome0716BLASTN svgBLASTP svg
NC_004663:14991451499145152152822384Bacteroides thetaiotaomicron VPI-5482, complete genome2e-105391BLASTN svgBLASTP svg
NC_015164:11824691182469120765225184Bacteroides salanitronis DSM 18170 chromosome, complete genome2e-99371BLASTN svgBLASTP svg
NC_015160:37296283729628374953219905Odoribacter splanchnicus DSM 20712 chromosome, complete genome1e-39172BLASTN svgBLASTP svg
NC_003228:36905963690596371414723552Bacteroides fragilis NCTC 9343, complete genome1e-20109BLASTN svgBLASTP svg
NC_006347:37604473760447380544144995Bacteroides fragilis YCH46, complete genome1e-20109BLASTN svgBLASTP svg
NC_004663:13654291365429138923123803Bacteroides thetaiotaomicron VPI-5482, complete genome8e-19103BLASTN svgBLASTP svg
NC_019960:659756*65975667867718922Prevotella dentalis DSM 3688 chromosome 1, complete sequence2e-1695.6BLASTN svgBLASTP svg
NC_006347:14387614387617632132446Bacteroides fragilis YCH46, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_015311:22817112281711230486823158Prevotella denticola F0289 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_007298:2947200*2947200297064623447Dechloromonas aromatica RCB, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_009512:4287605*4287605432250934905Pseudomonas putida F1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_004663:44647446477897534329Bacteroides thetaiotaomicron VPI-5482, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_002947:4484824*4484824451609931276Pseudomonas putida KT2440, complete genome3e-0661.9BLASTN svgBLASTP svg