Pre_GI: BLASTN Hits

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Query: NC_008596:3404832 Mycobacterium smegmatis str. MC2 155, complete genome

Start: 3404832, End: 3442687, Length: 37856

Host Lineage: Mycobacterium smegmatis; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Causes opportunistic infections. This genus comprises a number of Gram-positive, acid-fast, rod-shaped aerobic bacteria and is the only member of the family Mycobacteriaceae within the order Actinomycetales. Like other closely related Actinomycetales, such as Nocardia and Corynebacterium, mycobacteria have unusually high genomic DNA GC content and are capable of producing mycolic acids as major components of their cell wall. Mycobacterium smegmatis was initially isolated from human smegma. It is associated with soft tissue lesions following trauma or surgery. It is also reported as a possible factor in penile carcinogenesis.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008596:41529164152916417912726212Mycobacterium smegmatis str. MC2 155, complete genome02981BLASTN svgBLASTP svg
NC_008596:40432134043213408138238170Mycobacterium smegmatis str. MC2 155, complete genome02970BLASTN svgBLASTP svg
NC_002944:990009900011707318074Mycobacterium avium subsp. paratuberculosis K-10, complete genome01608BLASTN svgBLASTP svg
NC_008705:27631312763131279239929269Mycobacterium sp. KMS, complete genome2e-168601BLASTN svgBLASTP svg
NC_008146:27446122744612277451129900Mycobacterium sp. MCS, complete genome2e-168601BLASTN svgBLASTP svg
NC_014814:2588628*2588628264757658949Mycobacterium sp. Spyr1 chromosome, complete genome2e-143517BLASTN svgBLASTP svg
NC_008726:63359616335961637742441464Mycobacterium vanbaalenii PYR-1, complete genome2e-94355BLASTN svgBLASTP svg
NC_014318:7480669*7480669750464523977Amycolatopsis mediterranei U32 chromosome, complete genome3e-22115BLASTN svgBLASTP svg
NC_009921:41860004186000420611220113Frankia sp. EAN1pec, complete genome8e-1797.6BLASTN svgBLASTP svg
NC_008595:11766581176658119686720210Mycobacterium avium 104, complete genome5e-1591.7BLASTN svgBLASTP svg
NC_018531:36258103625810365959233783Arthrobacter sp. Rue61a chromosome, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_008711:34543593454359349427739919Arthrobacter aurescens TC1, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_013510:262888*26288828309920212Thermomonospora curvata DSM 43183, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_021177:16300016300018152218523Streptomyces fulvissimus DSM 40593, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_015580:34118023411802343087719076Novosphingobium sp. PP1Y, complete genome7e-0867.9BLASTN svgBLASTP svg