Query: NC_008543:2871747 Burkholderia cenocepacia HI2424 chromosome 2, complete sequence
Start: 2871747, End: 2901250, Length: 29504
Host Lineage: Burkholderia cenocepacia; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria
General Information: This organism (HI2424; BCC1) was isolated as part of a study to find this organism in natural environments. Samples taken from fields that were planted with onions in New York in 1999 and 2000 were examined and it was discovered that isolates were the same as ones that can infect CF patients. This species (genomovar III) is part of the Burkholderia cepacia complex, which consists of 9 closely related species, also known as genomovars. These organisms are commonly found in soil and all are opportunistic pathogens espcially in cystic fibrosis patients.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_008061:2368517 | 2368517 | 2399139 | 30623 | Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence | 0 | 40930 | BLASTN svg | BLASTP svg |
| NC_010515:1375091 | 1375091 | 1417151 | 42061 | Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence | 0 | 8241 | BLASTN svg | BLASTP svg |
| NC_010515:1428664 | 1428664 | 1447872 | 19209 | Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence | 0 | 4714 | BLASTN svg | BLASTP svg |
| NC_010552:58294* | 58294 | 102573 | 44280 | Burkholderia ambifaria MC40-6 chromosome 2, complete sequence | 0 | 3118 | BLASTN svg | BLASTP svg |
| NC_007511:3512100 | 3512100 | 3537892 | 25793 | Burkholderia sp. 383 chromosome 2, complete sequence | 0 | 2968 | BLASTN svg | BLASTP svg |
| NC_008543:127675 | 127675 | 153118 | 25444 | Burkholderia cenocepacia HI2424 chromosome 2, complete sequence | 0 | 2181 | BLASTN svg | BLASTP svg |
| NC_008061:2106848 | 2106848 | 2137894 | 31047 | Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence | 0 | 2181 | BLASTN svg | BLASTP svg |
| NC_015376:3320818 | 3320818 | 3358283 | 37466 | Burkholderia gladioli BSR3 chromosome chromosome 2, complete | 0 | 844 | BLASTN svg | BLASTP svg |
| NC_006351:2759708 | 2759708 | 2806207 | 46500 | Burkholderia pseudomallei K96243 chromosome 2, complete sequence | 4e-166 | 593 | BLASTN svg | BLASTP svg |
| NC_014722:1647978 | 1647978 | 1678206 | 30229 | Burkholderia rhizoxinica HKI 454, complete genome | 2e-143 | 517 | BLASTN svg | BLASTP svg |
| NC_010508:1865602 | 1865602 | 1889219 | 23618 | Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence | 3e-111 | 410 | BLASTN svg | BLASTP svg |
| NC_008543:2666846 | 2666846 | 2688142 | 21297 | Burkholderia cenocepacia HI2424 chromosome 2, complete sequence | 1e-89 | 339 | BLASTN svg | BLASTP svg |
| NC_008061:2582000 | 2582000 | 2608428 | 26429 | Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence | 1e-89 | 339 | BLASTN svg | BLASTP svg |
| NC_014117:2608000* | 2608000 | 2630731 | 22732 | Burkholderia sp. CCGE1002 chromosome chromosome 1, complete | 6e-85 | 323 | BLASTN svg | BLASTP svg |
| NC_008391:2045348* | 2045348 | 2073768 | 28421 | Burkholderia cepacia AMMD chromosome 2, complete sequence | 2e-54 | 222 | BLASTN svg | BLASTP svg |
| NC_014623:1600360* | 1600360 | 1630499 | 30140 | Stigmatella aurantiaca DW4/3-1 chromosome, complete genome | 2e-44 | 188 | BLASTN svg | BLASTP svg |
| NC_007509:971500 | 971500 | 991166 | 19667 | Burkholderia sp. 383 chromosome 3, complete sequence | 1e-30 | 143 | BLASTN svg | BLASTP svg |
| NC_010625:1602191 | 1602191 | 1634391 | 32201 | Burkholderia phymatum STM815 plasmid pBPHY01, complete sequence | 2e-26 | 129 | BLASTN svg | BLASTP svg |
| NC_019940:2731105 | 2731105 | 2760614 | 29510 | Thioflavicoccus mobilis 8321 chromosome, complete genome | 1e-15 | 93.7 | BLASTN svg | BLASTP svg |
| NC_009076:1102500 | 1102500 | 1124599 | 22100 | Burkholderia pseudomallei 1106a chromosome I, complete sequence | 6e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_009074:1092000 | 1092000 | 1112224 | 20225 | Burkholderia pseudomallei 668 chromosome I, complete sequence | 6e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_007509:1383013 | 1383013 | 1405999 | 22987 | Burkholderia sp. 383 chromosome 3, complete sequence | 9e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_007509:3668 | 3668 | 60331 | 56664 | Burkholderia sp. 383 chromosome 3, complete sequence | 9e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_003295:2669480 | 2669480 | 2697217 | 27738 | Ralstonia solanacearum GMI1000, complete genome | 4e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_015572:2713599 | 2713599 | 2736304 | 22706 | Methylomonas methanica MC09 chromosome, complete genome | 6e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_008340:1303607 | 1303607 | 1322156 | 18550 | Alkalilimnicola ehrlichei MLHE-1, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_018691:1322389* | 1322389 | 1344288 | 21900 | Alcanivorax dieselolei B5 chromosome, complete genome | 9e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_002927:5327094* | 5327094 | 5353999 | 26906 | Bordetella bronchiseptica RB50, complete genome | 9e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_016002:2652500 | 2652500 | 2671170 | 18671 | Pseudogulbenkiania sp. NH8B, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |