Pre_GI: BLASTN Hits

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Query: NC_008525:780500 Pediococcus pentosaceus ATCC 25745, complete genome

Start: 780500, End: 800642, Length: 20143

Host Lineage: Pediococcus pentosaceus; Pediococcus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: Use in fermentation of food products. A distinctive characteristic of pediococci is their ability to form tetrads via cell division in two perpendicular directions in a single plane. Like other lactic acid bacteria, species of Pediococcus are acid tolerant, cannot synthesize porphyrins, and possess a strictly fermentative (homofermentative) facultatively anaerobic metabolism with lactic acid as the major metabolic end product. They also occur in such food products as cured meat, raw sausages, and marinated fish, and are are used for biotechnological processing and preservation of foods. This bacterium can be isolated from a variety of plant materials and bacterial-ripened cheeses. This organism is used as an acid producing starter culture in the fermentation of some sausages, cucumbers, green beans, soy milk, and silage. Some strains have been reported to contain several (3-5) resident plasmids that render the bacterium capable of fermenting some sugars (raffinose, melibiose, and sucrose), as well as producing bacteriocins.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008525:10139791013979103527221294Pediococcus pentosaceus ATCC 25745, complete genome01707BLASTN svgBLASTP svg
NC_008526:19247611924761195064625886Lactobacillus casei ATCC 334, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008497:1111891*1111891114836436474Lactobacillus brevis ATCC 367, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_012469:1403412*1403412142484321432Streptococcus pneumoniae Taiwan19F-14, complete genome9e-0660BLASTN svgBLASTP svg
NC_012466:1367099*1367099138959922501Streptococcus pneumoniae JJA, complete genome9e-0660BLASTN svgBLASTP svg
NC_008533:1380406*1380406140546125056Streptococcus pneumoniae D39, complete genome9e-0660BLASTN svgBLASTP svg
NC_003098:1372875*1372875139793025056Streptococcus pneumoniae R6, complete genome9e-0660BLASTN svgBLASTP svg