Query: NC_008268:3335035 Rhodococcus sp. RHA1, complete genome
Start: 3335035, End: 3358001, Length: 22967
Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_012522:3867167* | 3867167 | 3897361 | 30195 | Rhodococcus opacus B4, complete genome | 0 | 1338 | BLASTN svg | BLASTP svg |
| NC_013169:1058463* | 1058463 | 1085369 | 26907 | Kytococcus sedentarius DSM 20547, complete genome | 4e-107 | 396 | BLASTN svg | BLASTP svg |
| NC_014814:4235477 | 4235477 | 4286921 | 51445 | Mycobacterium sp. Spyr1 chromosome, complete genome | 2e-35 | 159 | BLASTN svg | BLASTP svg |
| NC_015953:2681331* | 2681331 | 2705402 | 24072 | Streptomyces sp. SirexAA-E chromosome, complete genome | 4e-27 | 131 | BLASTN svg | BLASTP svg |
| NC_008699:56500 | 56500 | 80844 | 24345 | Nocardioides sp. JS614, complete genome | 1e-20 | 109 | BLASTN svg | BLASTP svg |
| NC_008726:494769 | 494769 | 515099 | 20331 | Mycobacterium vanbaalenii PYR-1, complete genome | 5e-17 | 97.6 | BLASTN svg | BLASTP svg |
| NC_008726:610000 | 610000 | 628820 | 18821 | Mycobacterium vanbaalenii PYR-1, complete genome | 5e-17 | 97.6 | BLASTN svg | BLASTP svg |
| NC_010725:3917369* | 3917369 | 3961688 | 44320 | Methylobacterium populi BJ001, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_009076:3765441 | 3765441 | 3801670 | 36230 | Burkholderia pseudomallei 1106a chromosome I, complete sequence | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_006350:3865584* | 3865584 | 3898099 | 32516 | Burkholderia pseudomallei K96243 chromosome 1, complete sequence | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_012522:98567 | 98567 | 122099 | 23533 | Rhodococcus opacus B4, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |