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Query: NC_008268:3335035 Rhodococcus sp. RHA1, complete genome

Start: 3335035, End: 3358001, Length: 22967

Host Lineage: Rhodococcus jostii; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This strain was isolated from soil contaminated with gamma-hexachlorocyclohexane (lindane: a toxic insecticide) in Japan. Polychlorinated biphenyl degrading bacterium. Rhodococcus jostii is capable of degrading a wide variety of polychlorinated biphenyls (PCBs), which are toxic compounds produced by industry, and is studied extensively for this reason. This microbe is being examined thoroughly under different environmental conditions in order to better understand metabolic pathways and gene functions.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_012522:3867167*3867167389736130195Rhodococcus opacus B4, complete genome01338BLASTN svgBLASTP svg
NC_013169:1058463*1058463108536926907Kytococcus sedentarius DSM 20547, complete genome4e-107396BLASTN svgBLASTP svg
NC_014814:42354774235477428692151445Mycobacterium sp. Spyr1 chromosome, complete genome2e-35159BLASTN svgBLASTP svg
NC_015953:2681331*2681331270540224072Streptomyces sp. SirexAA-E chromosome, complete genome4e-27131BLASTN svgBLASTP svg
NC_008699:56500565008084424345Nocardioides sp. JS614, complete genome1e-20109BLASTN svgBLASTP svg
NC_008726:49476949476951509920331Mycobacterium vanbaalenii PYR-1, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_008726:61000061000062882018821Mycobacterium vanbaalenii PYR-1, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_010725:3917369*3917369396168844320Methylobacterium populi BJ001, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_009076:37654413765441380167036230Burkholderia pseudomallei 1106a chromosome I, complete sequence7e-0763.9BLASTN svgBLASTP svg
NC_006350:3865584*3865584389809932516Burkholderia pseudomallei K96243 chromosome 1, complete sequence7e-0763.9BLASTN svgBLASTP svg
NC_012522:985679856712209923533Rhodococcus opacus B4, complete genome3e-0661.9BLASTN svgBLASTP svg