Query: NC_008148:583030 Rubrobacter xylanophilus DSM 9941, complete genome
Start: 583030, End: 609600, Length: 26571
Host Lineage: Rubrobacter xylanophilus; Rubrobacter; Rubrobacteraceae; Rubrobacterales; Actinobacteria; Bacteria
General Information: Cellulose-degrading bacterium. This genus contains two species: Rubrobacter radiotolerans and Rubrobacter xylanophilus. These two species represent the oldest lineage (deepest branch) of the Actinobacteria and are distantly related to Mycobacteria and Streptomycetes. Both species are thermophilic and exhibit high tolerance to radiation. Very little research has been done on these organisms and little is known other than their taxonomic characterization. Rubrobacter xylanophilus was isolated from a thermally polluted industrial runoff in the United Kingdom. Some strains of this species are capable of degrading hemicellulose and xylan (polymers of plant origin), and could play a significant role in the degradation of these compounds in the wood and paper industry as well as in the environment.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_008148:2498000 | 2498000 | 2550851 | 52852 | Rubrobacter xylanophilus DSM 9941, complete genome | 0 | 1965 | BLASTN svg | BLASTP svg |
NC_010551:846953 | 846953 | 868099 | 21147 | Burkholderia ambifaria MC40-6 chromosome 1, complete sequence | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_011145:4960940 | 4960940 | 4980252 | 19313 | Anaeromyxobacter sp. K, complete genome | 9e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_007963:2644930 | 2644930 | 2680189 | 35260 | Chromohalobacter salexigens DSM 3043, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_015052:2181514 | 2181514 | 2213818 | 32305 | Bifidobacterium longum subsp. infantis 157F, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_015067:2136048 | 2136048 | 2168969 | 32922 | Bifidobacterium longum subsp. longum JCM 1217, complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_007760:4911181 | 4911181 | 4938060 | 26880 | Anaeromyxobacter dehalogenans 2CP-C, complete genome | 8e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_011961:891815 | 891815 | 917241 | 25427 | Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence | 3e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_012526:4462* | 4462 | 27026 | 22565 | Deinococcus deserti VCD115, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_009937:53082 | 53082 | 76906 | 23825 | Azorhizobium caulinodans ORS 571, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_011894:6382636 | 6382636 | 6415599 | 32964 | Methylobacterium nodulans ORS 2060, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |