Pre_GI: BLASTN Hits

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Query: NC_008146:4019711 Mycobacterium sp. MCS, complete genome

Start: 4019711, End: 4042993, Length: 23283

Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008705:40530704053070407747524406Mycobacterium sp. KMS, complete genome037730BLASTN svgBLASTP svg
NC_009434:69558269558276739471813Pseudomonas stutzeri A1501, complete genome1e-1489.7BLASTN svgBLASTP svg
NC_009720:12488661248866127253723672Xanthobacter autotrophicus Py2, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_018691:34378213437821346323225412Alcanivorax dieselolei B5 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_014034:10366521036652106561128960Rhodobacter capsulatus SB1003 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_019673:15847391584739160360318865Saccharothrix espanaensis DSM 44229 complete genome2e-1075.8BLASTN svgBLASTP svg
AC_000091:45693794569379459254323165Escherichia coli W3110 DNA, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015873:63487*634878534421858Megasphaera elsdenii DSM 20460, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014217:27608982760898280329642399Starkeya novella DSM 506 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_007384:307013*30701333111524103Shigella sonnei Ss046, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_019977:30245430245432124418791Methanomethylovorans hollandica DSM 15978, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_018531:19912181991218201022919012Arthrobacter sp. Rue61a chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014363:1902868*1902868192872325856Olsenella uli DSM 7084 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg