Query: NC_008146:4019711 Mycobacterium sp. MCS, complete genome
Start: 4019711, End: 4042993, Length: 23283
Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_008705:4053070 | 4053070 | 4077475 | 24406 | Mycobacterium sp. KMS, complete genome | 0 | 37730 | BLASTN svg | BLASTP svg |
NC_009434:695582 | 695582 | 767394 | 71813 | Pseudomonas stutzeri A1501, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_009720:1248866 | 1248866 | 1272537 | 23672 | Xanthobacter autotrophicus Py2, complete genome | 1e-11 | 79.8 | BLASTN svg | BLASTP svg |
NC_018691:3437821 | 3437821 | 3463232 | 25412 | Alcanivorax dieselolei B5 chromosome, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_014034:1036652 | 1036652 | 1065611 | 28960 | Rhodobacter capsulatus SB1003 chromosome, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_019673:1584739 | 1584739 | 1603603 | 18865 | Saccharothrix espanaensis DSM 44229 complete genome | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
AC_000091:4569379 | 4569379 | 4592543 | 23165 | Escherichia coli W3110 DNA, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_015873:63487* | 63487 | 85344 | 21858 | Megasphaera elsdenii DSM 20460, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_014217:2760898 | 2760898 | 2803296 | 42399 | Starkeya novella DSM 506 chromosome, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_007384:307013* | 307013 | 331115 | 24103 | Shigella sonnei Ss046, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_019977:302454 | 302454 | 321244 | 18791 | Methanomethylovorans hollandica DSM 15978, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_018531:1991218 | 1991218 | 2010229 | 19012 | Arthrobacter sp. Rue61a chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_014363:1902868* | 1902868 | 1928723 | 25856 | Olsenella uli DSM 7084 chromosome, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |