Query: NC_008146:3401743 Mycobacterium sp. MCS, complete genome
Start: 3401743, End: 3425107, Length: 23365
Host Lineage: Mycobacterium; Mycobacterium; Mycobacteriaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: Mycobacterium MCS was isolated from soil in a wood preservative-contaminated land-treatment unit where remediation of polycyclic aromatic hydrocarbon (PAH) was occurring. This isolate mineralizes small- and large-ring PAHs, in contrast to other PAH-degrading microbes. Bioremediation of PAHs offers an attractive solution to pollution clean-up because it can occur on site and at relative little cost compared to alternatives. This isolate belongs to a fast-growing group of the mycobacterium genus that is defined as Gram-positive, acid-fast, pleomorphic, non-motile rods. Bioremediation of soils contaminated with wood preservatives containing polycyclic aromatic hydrocarbons (PAHs) is desired because of their toxic, mutagenic, and carcinogenic properties. Creosote wood preservative–contaminated soils at the Champion International Superfund Site in Libby, Montana currently undergo bioremediation in a prepared-bed land treatment unit (LTU) process.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_008705:3430839 | 3430839 | 3453389 | 22551 | Mycobacterium sp. KMS, complete genome | 0 | 31660 | BLASTN svg | BLASTP svg |
NC_009077:3376351 | 3376351 | 3398926 | 22576 | Mycobacterium sp. JLS, complete genome | 0 | 31590 | BLASTN svg | BLASTP svg |
NC_010612:3813481 | 3813481 | 3841145 | 27665 | Mycobacterium marinum M, complete genome | 0 | 662 | BLASTN svg | BLASTP svg |
NC_008711:1224164* | 1224164 | 1246018 | 21855 | Arthrobacter aurescens TC1, complete genome | 1e-79 | 305 | BLASTN svg | BLASTP svg |
NC_006361:4521820 | 4521820 | 4544401 | 22582 | Nocardia farcinica IFM 10152, complete genome | 3e-77 | 297 | BLASTN svg | BLASTP svg |
NC_014814:1425500* | 1425500 | 1444351 | 18852 | Mycobacterium sp. Spyr1 chromosome, complete genome | 3e-43 | 184 | BLASTN svg | BLASTP svg |
NC_009077:4810379 | 4810379 | 4839610 | 29232 | Mycobacterium sp. JLS, complete genome | 1e-26 | 129 | BLASTN svg | BLASTP svg |
NC_014830:1871135* | 1871135 | 1901864 | 30730 | Intrasporangium calvum DSM 43043 chromosome, complete genome | 5e-23 | 117 | BLASTN svg | BLASTP svg |
NC_018583:95388 | 95388 | 134611 | 39224 | Gordonia sp. KTR9 plasmid pGKT3, complete sequence | 1e-20 | 109 | BLASTN svg | BLASTP svg |
NC_013530:1649214 | 1649214 | 1681587 | 32374 | Xylanimonas cellulosilytica DSM 15894, complete genome | 8e-19 | 103 | BLASTN svg | BLASTP svg |
NC_009480:1261961* | 1261961 | 1287331 | 25371 | Clavibacter michiganensis subsp. michiganensis NCPPB 382, complete | 5e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_019673:7400817 | 7400817 | 7421369 | 20553 | Saccharothrix espanaensis DSM 44229 complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_018691:2254566 | 2254566 | 2283738 | 29173 | Alcanivorax dieselolei B5 chromosome, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_008570:3777469* | 3777469 | 3802300 | 24832 | Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_007722:2993852 | 2993852 | 3016438 | 22587 | Erythrobacter litoralis HTCC2594, complete genome | 7e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_013421:801542 | 801542 | 823694 | 22153 | Pectobacterium wasabiae WPP163, complete genome | 3e-06 | 61.9 | BLASTN svg | BLASTP svg |