Pre_GI: BLASTN Hits

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Query: NC_007948:1695500 Polaromonas sp. JS666, complete genome

Start: 1695500, End: 1714306, Length: 18807

Host Lineage: Polaromonas; Polaromonas; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from sediment contaminated with cis-dichloroethane (cDCE), a common pollutant resulting from widespread manufacture and use of industrial solvents. This bacterium is the only known organism capable of using cDCE as a sole carbon and energy source. The ability of this strain to convert ethene to epoxyethane suggests that the first step in the cDCE biodegradation pathway is the oxidation of cDCE to an epoxide compound. Bacteria that are able to grow on cDCE are rare, and have only been found in very few highly selective artificial environments. The discovery of this bacteria may provide a low cost, self-sustaining bioremediation method in areas where cDCE is a problem contaminant.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015422:45080284508028454712739100Alicycliphilus denitrificans K601 chromosome, complete genome4e-134486BLASTN svgBLASTP svg
NC_007948:51789351789353927721385Polaromonas sp. JS666, complete genome5e-103383BLASTN svgBLASTP svg
NC_007948:1972290*1972290201891546626Polaromonas sp. JS666, complete genome2e-59238BLASTN svgBLASTP svg
NC_007948:360199*36019939230232104Polaromonas sp. JS666, complete genome5e-29137BLASTN svgBLASTP svg
NC_003037:12456451245645126907723433Sinorhizobium meliloti 1021 plasmid pSymA, complete sequence1e-26129BLASTN svgBLASTP svg
NC_014910:17650651765065179274827684Alicycliphilus denitrificans BC chromosome, complete genome7e-22113BLASTN svgBLASTP svg