Pre_GI: BLASTN Hits

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Query: NC_007778:5079500 Rhodopseudomonas palustris HaA2, complete genome

Start: 5079500, End: 5101702, Length: 22203

Host Lineage: Rhodopseudomonas palustris; Rhodopseudomonas; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Four different strains were isolated from 2 sites, one pristine and one polluted. Environmental bacterium with potential use in bioremediation. This organism has a diverse metabolism and is capable of growth using light, inorganic, or organic compounds as energy sources and carbon dioxide or organic compounds as carbon sources. Commonly found in soil and water environments this bacterium is also capable of degrading a wide range of toxic organic compounds, and may be of use in bioremediation of polluted sites. The bacterium undergoes differentiation to produce a stalked nonmotile cell and a motile flagellated cell. In the presence of light, this bacterium produces a number of intracellular membranous vesicles to house the photosynthetic reaction centers.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015593:2553500*2553500259301139512Sphingobium chlorophenolicum L-1 chromosome chromosome 1, complete1e-26129BLASTN svgBLASTP svg
NC_007778:3784104*3784104381456530462Rhodopseudomonas palustris HaA2, complete genome8e-22113BLASTN svgBLASTP svg
NC_007958:830000*83000086140231403Rhodopseudomonas palustris BisB5, complete genome5e-1797.6BLASTN svgBLASTP svg
NC_014318:3947845*3947845397099423150Amycolatopsis mediterranei U32 chromosome, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_008686:405159*40515944047735319Paracoccus denitrificans PD1222 chromosome 1, complete sequence1e-1489.7BLASTN svgBLASTP svg
NC_008543:61000610008061919620Burkholderia cenocepacia HI2424 chromosome 2, complete sequence1e-1489.7BLASTN svgBLASTP svg
NC_008061:21930002193000221082217823Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence1e-1489.7BLASTN svgBLASTP svg
NC_012791:4007780*4007780403067322894Variovorax paradoxus S110 chromosome 1, complete genome7e-1383.8BLASTN svgBLASTP svg
NC_012721:25561602556160260386447705Burkholderia glumae BGR1 chromosome 2, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_015593:2103815*2103815214825244438Sphingobium chlorophenolicum L-1 chromosome chromosome 1, complete4e-1177.8BLASTN svgBLASTP svg
NC_015976:2900891*2900891292514524255Sphingobium sp. SYK-6, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_009720:50790485079048510209923052Xanthobacter autotrophicus Py2, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_009943:1637582*1637582166083323252Candidatus Desulfococcus oleovorans Hxd3, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009883:1262000*1262000128409922100Rickettsia bellii OSU 85-389, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_007940:266000*26600028816822169Rickettsia bellii RML369-C, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_009943:97090197090199500524105Candidatus Desulfococcus oleovorans Hxd3, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_020054:31324783132478315676324286Fibrella aestuarina BUZ 2 drat genome7e-0763.9BLASTN svgBLASTP svg
NC_013159:2913927*2913927293423220306Saccharomonospora viridis DSM 43017, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010170:1661915*1661915168523723323Bordetella petrii, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009883:14290001429000145248923490Rickettsia bellii OSU 85-389, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_006677:1596560*1596560166542268863Gluconobacter oxydans 621H, complete genome3e-0661.9BLASTN svgBLASTP svg