Pre_GI: BLASTN Hits

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Query: NC_006569:370846 Silicibacter pomeroyi DSS-3 megaplasmid, complete sequence

Start: 370846, End: 390134, Length: 19289

Host Lineage: Ruegeria pomeroyi; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria

General Information: Formerly Silicibacter pomeroyi, his marine bacterium is a member of the Roseobacter clade and was isolated off of the coast of Georgia in 1998. Dimethylsulfoniopropionate-degrading bacterium. Ruegeria pomeroyi is capable of degrading the organic sulfur compound DMSP (dimethylsulfoniopropionate) and can metabolize a number of sulfur compounds. DMSP is synthesized by marine algae and the degradation product dimethylsulfide contributes to the global sulfur cycle.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_003911:25404532540453256752127069Silicibacter pomeroyi DSS-3, complete genome4e-1797.6BLASTN svgBLASTP svg
NC_012660:3689223*3689223371658727365Pseudomonas fluorescens SBW25 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_007645:36880003688000371059922600Hahella chejuensis KCTC 2396, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_006569:69939*6993910335033412Silicibacter pomeroyi DSS-3 megaplasmid, complete sequence4e-0867.9BLASTN svgBLASTP svg
NC_007953:14347051434705145812223418Burkholderia xenovorans LB400 chromosome 3, complete sequence6e-0763.9BLASTN svgBLASTP svg