Pre_GI: BLASTN Hits

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Query: NC_006512:1942000 Idiomarina loihiensis L2TR, complete genome

Start: 1942000, End: 1965968, Length: 23969

Host Lineage: Idiomarina loihiensis; Idiomarina; Idiomarinaceae; Alteromonadales; Proteobacteria; Bacteria

General Information: This is the type strain for this organism, which was isolated from a hydrothermal vent at a depth of 1300 m from the Lo'ihi Seamount southeast of Hawaii. This organism grows optimally in salt concentrations of 7.5 to 10%. Genome comparison has suggested that the bacterium has maintained its amino acid transport and degradation systems but lost sugar transport and certain sugar metabolic genes suggesting that it lives on amino acids rather than sugars. This may be in keeping with the environment this organism grows in, which is at hydrothermal deep sea vents that are characterized by collections of proteinaceous particles. This organism may colonize these particles by producing exopolysaccharides.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013282:25827202582720260756224843Cronobacter turicensis, complete genome6e-32147BLASTN svgBLASTP svg
NC_020181:73447773447775586321387Enterobacter aerogenes EA1509E, complete genome1e-26129BLASTN svgBLASTP svg
NC_015663:47358084735808475809922292Enterobacter aerogenes KCTC 2190 chromosome, complete genome1e-26129BLASTN svgBLASTP svg
NC_020211:29851572985157300925724101Serratia marcescens WW4, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_009092:25295182529518255250622989Shewanella loihica PV-4, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013416:15883691588369161218823820Aggregatibacter actinomycetemcomitans D11S-1, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014500:25258802525880254587920000Dickeya dadantii 3937 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010611:24083924083927225731419Acinetobacter baumannii ACICU, complete genome3e-0661.9BLASTN svgBLASTP svg