Query: NC_006361:5546232 Nocardia farcinica IFM 10152, complete genome
Start: 5546232, End: 5566130, Length: 19899
Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria
General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_015588:2281354 | 2281354 | 2304713 | 23360 | Isoptericola variabilis 225 chromosome, complete genome | 4e-116 | 426 | BLASTN svg | BLASTP svg |
| NC_018750:6070260 | 6070260 | 6101099 | 30840 | Streptomyces venezuelae ATCC 10712, complete genome | 2e-25 | 125 | BLASTN svg | BLASTP svg |
| NC_010617:2626000 | 2626000 | 2648160 | 22161 | Kocuria rhizophila DC2201, complete genome | 2e-25 | 125 | BLASTN svg | BLASTP svg |
| NC_012669:549500 | 549500 | 571655 | 22156 | Beutenbergia cavernae DSM 12333, complete genome | 5e-23 | 117 | BLASTN svg | BLASTP svg |
| NC_006958:359760 | 359760 | 404432 | 44673 | Corynebacterium glutamicum ATCC 13032, complete genome | 6e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_003450:359759 | 359759 | 404433 | 44675 | Corynebacterium glutamicum ATCC 13032, complete genome | 6e-13 | 83.8 | BLASTN svg | BLASTP svg |
| NC_011757:1553500 | 1553500 | 1578857 | 25358 | Methylobacterium chloromethanicum CM4, complete genome | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_004369:1051013* | 1051013 | 1073859 | 22847 | Corynebacterium efficiens YS-314, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_006087:885760 | 885760 | 912599 | 26840 | Leifsonia xyli subsp. xyli str. CTCB07, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
| NC_015138:2025000* | 2025000 | 2047854 | 22855 | Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_007952:1453000 | 1453000 | 1479862 | 26863 | Burkholderia xenovorans LB400 chromosome 2, complete sequence | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_008061:2153495 | 2153495 | 2183379 | 29885 | Burkholderia cenocepacia AU 1054 chromosome 2, complete sequence | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_003911:1791878* | 1791878 | 1852654 | 60777 | Silicibacter pomeroyi DSS-3, complete genome | 6e-07 | 63.9 | BLASTN svg | BLASTP svg |
| NC_015138:4205986* | 4205986 | 4233128 | 27143 | Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete | 9e-06 | 60 | BLASTN svg | BLASTP svg |
| NC_014815:3272791* | 3272791 | 3294858 | 22068 | Micromonospora sp. L5 chromosome, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
| NC_013595:891897 | 891897 | 911544 | 19648 | Streptosporangium roseum DSM 43021, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |
| NC_009778:1717458 | 1717458 | 1759143 | 41686 | Enterobacter sakazakii ATCC BAA-894, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |