Pre_GI: BLASTN Hits

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Query: NC_006361:4597718 Nocardia farcinica IFM 10152, complete genome

Start: 4597718, End: 4628935, Length: 31218

Host Lineage: Nocardia farcinica; Nocardia; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This type strain was isolated from the bronchus of a male Japanese patient. Opportunistic human pathogen. This genus was originally described from specimens isolated by plating soil suspensions on diagnostic sensitivity test plates augmented with antifungal agents. Organisms in this genus cause opportunistic human pulmonary and systemic nocardiosis. This can complicate existing debilitating conditions such as leukemia, lymphoma, or other neoplasms, or illnesses in patients with compromised immune systems.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007777:12960001296000131759921600Frankia sp. CcI3, complete genome5e-175622BLASTN svgBLASTP svg
NC_018532:166468*16646821844051973Arthrobacter sp. Rue61a plasmid p232, complete sequence1e-123452BLASTN svgBLASTP svg
NC_009077:87416487416490865534492Mycobacterium sp. JLS, complete genome2e-121444BLASTN svgBLASTP svg
NC_014814:85912485912490088141758Mycobacterium sp. Spyr1 chromosome, complete genome6e-116426BLASTN svgBLASTP svg
NC_013235:17615391761539178059919061Nakamurella multipartita DSM 44233, complete genome6e-116426BLASTN svgBLASTP svg
NC_013947:16659941665994169310927116Stackebrandtia nassauensis DSM 44728 chromosome, complete genome1e-73285BLASTN svgBLASTP svg
NC_018681:7624000*7624000764748423485Nocardia brasiliensis ATCC 700358 chromosome, complete genome1e-46196BLASTN svgBLASTP svg
NC_014221:1277022*1277022129617619155Truepera radiovictrix DSM 17093 chromosome, complete genome6e-39170BLASTN svgBLASTP svg
NC_015312:848403*84840386771719315Pseudonocardia dioxanivorans CB1190 chromosome, complete genome9e-38167BLASTN svgBLASTP svg
NC_014814:3926676*3926676394894522270Mycobacterium sp. Spyr1 chromosome, complete genome1e-30143BLASTN svgBLASTP svg
NC_010545:1729161*1729161175559626436Corynebacterium urealyticum DSM 7109, complete genome1e-30143BLASTN svgBLASTP svg
NC_013757:1343396*1343396136140718012Geodermatophilus obscurus DSM 43160, complete genome1e-27133BLASTN svgBLASTP svg
NC_006087:23750023750026462927130Leifsonia xyli subsp. xyli str. CTCB07, complete genome1e-27133BLASTN svgBLASTP svg
NC_015576:808926*80892683565426729Mycobacterium sp. JDM601 chromosome, complete genome5e-27131BLASTN svgBLASTP svg
NC_015673:464630*46463049232127692Corynebacterium resistens DSM 45100 chromosome, complete genome5e-27131BLASTN svgBLASTP svg
NC_014117:132524*13252417885446331Burkholderia sp. CCGE1002 chromosome chromosome 1, complete2e-26129BLASTN svgBLASTP svg
NC_019673:1039258*1039258106559926342Saccharothrix espanaensis DSM 44229 complete genome3e-22115BLASTN svgBLASTP svg
NC_013510:17034641703464172659923136Thermomonospora curvata DSM 43183, complete genome3e-22115BLASTN svgBLASTP svg
NC_013093:1036772*1036772108759950828Actinosynnema mirum DSM 43827, complete genome3e-22115BLASTN svgBLASTP svg
NC_013714:13765001376500141614039641Bifidobacterium dentium Bd1, complete genome4e-18101BLASTN svgBLASTP svg
NC_008596:41529164152916417912726212Mycobacterium smegmatis str. MC2 155, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_014761:22480002248000227024722248Oceanithermus profundus DSM 14977 chromosome, complete genome2e-1799.6BLASTN svgBLASTP svg
NC_015656:1830220*1830220184914718928Frankia symbiont of Datisca glomerata chromosome, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_014215:1190447*1190447121409923653Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,1e-1593.7BLASTN svgBLASTP svg
NC_014151:40213944021394406852347130Cellulomonas flavigena DSM 20109 chromosome, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_014814:4809607*4809607483377924173Mycobacterium sp. Spyr1 chromosome, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_009720:75061275061278422333612Xanthobacter autotrophicus Py2, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_015312:1265797*1265797133663070834Pseudonocardia dioxanivorans CB1190 chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_015588:2200517*2200517222724526729Isoptericola variabilis 225 chromosome, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_009720:33176423317642334276225121Xanthobacter autotrophicus Py2, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_003047:53615153615156019924049Sinorhizobium meliloti 1021, complete genome4e-1281.8BLASTN svgBLASTP svg
NC_014814:2588628*2588628264757658949Mycobacterium sp. Spyr1 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_014221:79236379236381768725325Truepera radiovictrix DSM 17093 chromosome, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_013757:1888850*1888850193149042641Geodermatophilus obscurus DSM 43160, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_008726:11425001142500117062228123Mycobacterium vanbaalenii PYR-1, complete genome2e-1179.8BLASTN svgBLASTP svg
NC_013173:815696*81569684198426289Desulfomicrobium baculatum DSM 4028, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_015434:24600532460053249159931547Verrucosispora maris AB-18-032 chromosome, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_015434:666692*66669270459937908Verrucosispora maris AB-18-032 chromosome, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_015740:2407500*2407500244682739328Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete2e-1075.8BLASTN svgBLASTP svg
NC_010524:4644587*4644587468982245236Leptothrix cholodnii SP-6, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008618:10915*109153564524731Bifidobacterium adolescentis ATCC 15703, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_014963:76703476703479552128488Terriglobus saanensis SP1PR4 chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_009921:4757148*4757148478108523938Frankia sp. EAN1pec, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_009142:1242850*1242850126110818259Saccharopolyspora erythraea NRRL 2338, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_003888:7561923*7561923764778785865Streptomyces coelicolor A3(2), complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011662:31783131783134822530395Thauera sp. MZ1T, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011769:24720224720227380526604Desulfovibrio vulgaris str. 'Miyazaki F', complete genome2e-0765.9BLASTN svgBLASTP svg
NC_011830:693555*69355571893125377Desulfitobacterium hafniense DCB-2, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013595:52822075282207531442932223Streptosporangium roseum DSM 43021, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_013739:50123945012394503222219829Conexibacter woesei DSM 14684, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014210:3671495*3671495369312021626Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,2e-0765.9BLASTN svgBLASTP svg
NC_014666:80160668016066805302136956Frankia sp. EuI1c chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014218:4424*44242609921676Arcanobacterium haemolyticum DSM 20595 chromosome, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_015422:18761021876102190372527624Alicycliphilus denitrificans K601 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_012803:1094679*1094679111581321135Micrococcus luteus NCTC 2665, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_009049:1934398*1934398196979735400Rhodobacter sphaeroides ATCC 17029 chromosome 1, complete sequence4e-0661.9BLASTN svgBLASTP svg
NC_007511:33713193371319339850027182Burkholderia sp. 383 chromosome 2, complete sequence4e-0661.9BLASTN svgBLASTP svg