Pre_GI: BLASTN Hits

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Query: NC_005363:2172444 Bdellovibrio bacteriovorus HD100, complete genome

Start: 2172444, End: 2193099, Length: 20656

Host Lineage: Bdellovibrio bacteriovorus; Bdellovibrio; Bdellovibrionaceae; Bdellovibrionales; Proteobacteria; Bacteria

General Information: This organism is unique in that it is a bacteriolytic microbe that preys on other gram negative bacteria. It is found throughout soil, sewage, and aquatic environments, and is often associated with biofilms. This organism has a biphasic lifestyle which consists of a free living and motile phase, and an attack phase where the bacterium attaches to a host cell, burrows into the periplasm, and begins to degrade the host from the inside out. The organism sheds its flagellum once it makes irreversible contact with the host, and when it is inside, begins to form a bdelloplast, resulting in degradation of the host cell inner membrane and alteration of its peptidoglycan layer, resulting in a spherical cell. The Bdellovibrio cell elongates until it forms a long coiled structure which then divides, forming many flagellated progeny which continue the degradation of the host cell to propagate the life cycle. The genome encodes a large number of degradative and lytic enzymes which are used to degrade the host organism. The organism has numerous deficiencies in its amino acid biosynthetic pathways, suggesting it utilizes prey metabolites for protein synthesis.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_014623:4535544*4535544458023544692Stigmatella aurantiaca DW4/3-1 chromosome, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_020244:33583993358399337822319825Bacillus subtilis XF-1, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_012815:1862373*1862373188610023728Bifidobacterium animalis subsp. lactis DSM 10140, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_006510:59133959133963985748519Geobacillus kaustophilus HTA426, complete genome2e-0661.9BLASTN svgBLASTP svg