Pre_GI: BLASTN Hits

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Query: NC_004668:3118500 Enterococcus faecalis V583, complete genome

Start: 3118500, End: 3139599, Length: 21100

Host Lineage: Enterococcus faecalis; Enterococcus; Enterococcaceae; Lactobacillales; Firmicutes; Bacteria

General Information: This strain is one of the first vancomycin-resistant strains isolated. This isolate came from a blood culture derived from a chronically-infected patient in 1987 from Barnes Hospital in St. Louis, Missouri, USA. This strain was found to lack the cytolysin gene and a surface adhesin, Esp, that contributes to urinary tract infections. Mobile genetic elements make up one quarter of the genome. This genera consists of organisms typically found in the intestines of mammals, although through fecal contamination they can appear in sewage, soil, and water. They cause a number of infections that are becoming increasingly a problem due to the number of antibiotic resistance mechanisms these organisms have picked up. Both Enterococcus faecalis and Enterococcus faecium cause similar diseases in humans, and are mainly distinguished by their metabolic capabilities. This opportunistic pathogen can cause urinary tract infections, bacteremia (bacteria in the blood), and infective endocarditis (inflammation of the membrane surrounding the heart), similar to infections caused by Enterococcus faecium. Hospital-acquired infections from this organism are on the rise due to the emergence of antiobiotic resistance strains. Enterococcus faecalis produces a cytolysin toxin that is encoded on various mobile genetic elements, pathogenicity islands, and conjugative plasmids. The cytolysin aids in pathogenesis, possibly by causing destruction of cells such as erythrocytes, which allows access to new nutrients for the organism.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004668:2938000*2938000296113823139Enterococcus faecalis V583, complete genome1e-153551BLASTN svgBLASTP svg
NC_008555:2597980*2597980262082422845Listeria welshimeri serovar 6b str. SLCC5334, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_020995:32525003252500327359921100Enterococcus casseliflavus EC20, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015428:1668465*1668465168767919215Lactobacillus buchneri NRRL B-30929 chromosome, complete genome1e-0560BLASTN svgBLASTP svg