Query: NC_004463:6924150 Bradyrhizobium japonicum USDA 110, complete genome
Start: 6924150, End: 6964424, Length: 40275
Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria
General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_015138:2270181 | 2270181 | 2290906 | 20726 | Acidovorax avenae subsp. avenae ATCC 19860 chromosome, complete | 9e-20 | 107 | BLASTN svg | BLASTP svg |
| NC_013194:963735 | 963735 | 1001918 | 38184 | Candidatus Accumulibacter phosphatis clade IIA str. UW-1, complete | 8e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_010552:2331486 | 2331486 | 2354099 | 22614 | Burkholderia ambifaria MC40-6 chromosome 2, complete sequence | 8e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_010515:2037825 | 2037825 | 2062188 | 24364 | Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence | 8e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_010338:4530403* | 4530403 | 4554192 | 23790 | Caulobacter sp. K31, complete genome | 8e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_007778:3784104* | 3784104 | 3814565 | 30462 | Rhodopseudomonas palustris HaA2, complete genome | 3e-13 | 85.7 | BLASTN svg | BLASTP svg |
| NC_007958:2423335* | 2423335 | 2445650 | 22316 | Rhodopseudomonas palustris BisB5, complete genome | 5e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_014006:3124818* | 3124818 | 3170345 | 45528 | Sphingobium japonicum UT26S chromosome 1, complete genome | 2e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_010524:3302398 | 3302398 | 3329243 | 26846 | Leptothrix cholodnii SP-6, complete genome | 2e-11 | 79.8 | BLASTN svg | BLASTP svg |
| NC_007434:3452985 | 3452985 | 3473022 | 20038 | Burkholderia pseudomallei 1710b chromosome I, complete sequence | 8e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_011004:2507566* | 2507566 | 2531375 | 23810 | Rhodopseudomonas palustris TIE-1, complete genome | 8e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_016027:2047954* | 2047954 | 2110217 | 62264 | Gluconacetobacter xylinus NBRC 3288, complete genome | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
| NC_011757:5693584* | 5693584 | 5713316 | 19733 | Methylobacterium chloromethanicum CM4, complete genome | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
| NC_007651:1662558 | 1662558 | 1684422 | 21865 | Burkholderia thailandensis E264 chromosome I, complete sequence | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_011894:983572 | 983572 | 1015599 | 32028 | Methylobacterium nodulans ORS 2060, complete genome | 8e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_010505:2657683 | 2657683 | 2681774 | 24092 | Methylobacterium radiotolerans JCM 2831, complete genome | 8e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_015186:36502* | 36502 | 59883 | 23382 | Acidiphilium multivorum AIU301, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_007712:1601499 | 1601499 | 1632926 | 31428 | Sodalis glossinidius str. 'morsitans', complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_008435:1215437* | 1215437 | 1312091 | 96655 | Rhodopseudomonas palustris BisA53, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |