Pre_GI: BLASTN Hits

Some Help

Query: NC_004463:1898648 Bradyrhizobium japonicum USDA 110, complete genome

Start: 1898648, End: 1964255, Length: 65608

Host Lineage: Bradyrhizobium diazoefficiens; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain was isolated from Glycine hispida in 1959 in Florida, USA, and has been widely studied because of its superior symbiotic nitrogen fixation with soybeans as compared to other strains. This strain contains a 681 Kb symbiosis island that contains genes for nitrogen fixation and root nodule formation. The chromosome also contains genes resembling those of type III and IV secretion systems.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_004463:18725371872537189486322327Bradyrhizobium japonicum USDA 110, complete genome02765BLASTN svgBLASTP svg
NC_004463:20595002059500207783918340Bradyrhizobium japonicum USDA 110, complete genome02196BLASTN svgBLASTP svg
NC_004463:17490001749000176859919600Bradyrhizobium japonicum USDA 110, complete genome01923BLASTN svgBLASTP svg
NC_004463:22624672262467231174249276Bradyrhizobium japonicum USDA 110, complete genome01899BLASTN svgBLASTP svg
NC_002678:50606705060670511283352164Mesorhizobium loti MAFF303099, complete genome9e-55224BLASTN svgBLASTP svg
NC_011894:40669264066926411059943674Methylobacterium nodulans ORS 2060, complete genome5e-44188BLASTN svgBLASTP svg
NC_011757:11212621121262114088219621Methylobacterium chloromethanicum CM4, complete genome2e-43186BLASTN svgBLASTP svg
NC_011757:39881*398817409934219Methylobacterium chloromethanicum CM4, complete genome2e-43186BLASTN svgBLASTP svg
NC_012808:1122341*1122341115920936869Methylobacterium extorquens AM1, complete genome2e-43186BLASTN svgBLASTP svg
NC_012808:37118063711806373409922294Methylobacterium extorquens AM1, complete genome2e-43186BLASTN svgBLASTP svg
NC_012808:4137000*4137000416801731018Methylobacterium extorquens AM1, complete genome2e-43186BLASTN svgBLASTP svg
NC_012808:4235567*4235567425812622560Methylobacterium extorquens AM1, complete genome2e-43186BLASTN svgBLASTP svg
NC_012808:92198592198594462922645Methylobacterium extorquens AM1, complete genome2e-43186BLASTN svgBLASTP svg
NC_012811:11053951105395112959924205Methylobacterium extorquens AM1 megaplasmid, complete sequence2e-43186BLASTN svgBLASTP svg
NC_012811:22754122754127111643576Methylobacterium extorquens AM1 megaplasmid, complete sequence2e-43186BLASTN svgBLASTP svg
NC_010529:29650029650034723950740Cupriavidus taiwanensis plasmid pRALTA, complete sequence1e-35161BLASTN svgBLASTP svg
NC_015186:1126830*1126830116450437675Acidiphilium multivorum AIU301, complete genome4e-32149BLASTN svgBLASTP svg
NC_015186:347346*34734637448527140Acidiphilium multivorum AIU301, complete genome4e-32149BLASTN svgBLASTP svg
NC_013856:69200069200071990027901Azospirillum sp. B510 plasmid pAB510b, complete sequence2e-31147BLASTN svgBLASTP svg
NC_013959:82686882686887209945232Sideroxydans lithotrophicus ES-1 chromosome, complete genome1e-26131BLASTN svgBLASTP svg
NC_015656:33007473300747332502424278Frankia symbiont of Datisca glomerata chromosome, complete genome1e-1697.6BLASTN svgBLASTP svg
NC_011420:3822765*3822765384728424520Rhodospirillum centenum SW, complete genome9e-1591.7BLASTN svgBLASTP svg
NC_011666:30015133001513302603924527Methylocella silvestris BL2, complete genome1e-1387.7BLASTN svgBLASTP svg
NC_008278:74097117409711743227422564Frankia alni ACN14a, complete genome2e-1283.8BLASTN svgBLASTP svg
NC_003047:33600003360000341859958600Sinorhizobium meliloti 1021, complete genome8e-1281.8BLASTN svgBLASTP svg
NC_011892:779757797512040642432Methylobacterium nodulans ORS 2060 plasmid pMNOD01, complete8e-1281.8BLASTN svgBLASTP svg
NC_011894:43605774360577439709936523Methylobacterium nodulans ORS 2060, complete genome8e-1281.8BLASTN svgBLASTP svg
NC_011894:6418000*6418000644309925100Methylobacterium nodulans ORS 2060, complete genome8e-1281.8BLASTN svgBLASTP svg
NC_011758:24766624766626663818973Methylobacterium chloromethanicum CM4 plasmid pMCHL01, complete1e-1077.8BLASTN svgBLASTP svg
NC_004463:16830001683000171788734888Bradyrhizobium japonicum USDA 110, complete genome1e-1077.8BLASTN svgBLASTP svg
NC_008340:22726922272692229766424973Alkalilimnicola ehrlichei MLHE-1, complete genome2e-0973.8BLASTN svgBLASTP svg
NC_007626:1746475*1746475178760841134Magnetospirillum magneticum AMB-1, complete genome8e-0971.9BLASTN svgBLASTP svg
NC_014166:33138*331385604122904Arcobacter nitrofigilis DSM 7299 chromosome, complete genome8e-0971.9BLASTN svgBLASTP svg
NC_015376:32497733249773327345123679Burkholderia gladioli BSR3 chromosome chromosome 2, complete3e-0869.9BLASTN svgBLASTP svg
NC_013194:16311341631134166791036777Candidatus Accumulibacter phosphatis clade IIA str. UW-1, complete3e-0869.9BLASTN svgBLASTP svg
NC_012724:31004303100430312207221643Burkholderia glumae BGR1 chromosome 1, complete genome1e-0767.9BLASTN svgBLASTP svg
NC_011004:11748131174813119811023298Rhodopseudomonas palustris TIE-1, complete genome5e-0765.9BLASTN svgBLASTP svg
NC_002937:61400061400064122427225Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, complete2e-0663.9BLASTN svgBLASTP svg
NC_008751:27740002774000279735623357Desulfovibrio vulgaris subsp. vulgaris DP4, complete genome2e-0663.9BLASTN svgBLASTP svg
NC_012881:47804247804249931621275Desulfovibrio salexigens DSM 2638, complete genome8e-0661.9BLASTN svgBLASTP svg
NC_012791:72181372181376114739335Variovorax paradoxus S110 chromosome 1, complete genome8e-0661.9BLASTN svgBLASTP svg
NC_010515:1618093*1618093165515937067Burkholderia cenocepacia MC0-3 chromosome 2, complete sequence8e-0661.9BLASTN svgBLASTP svg