Query: NC_003911:2540453 Silicibacter pomeroyi DSS-3, complete genome
Start: 2540453, End: 2567521, Length: 27069
Host Lineage: Ruegeria pomeroyi; Ruegeria; Rhodobacteraceae; Rhodobacterales; Proteobacteria; Bacteria
General Information: Formerly Silicibacter pomeroyi, his marine bacterium is a member of the Roseobacter clade and was isolated off of the coast of Georgia in 1998. Dimethylsulfoniopropionate-degrading bacterium. Capable of degrading the organic sulfur compound DMSP (dimethylsulfoniopropionate) and can metabolize a number of sulfur compounds. DMSP is synthesized by marine algae and the degradation product dimethylsulfide contributes to the global sulfur cycle.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
| Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
|---|
| NC_003911:1749467* | 1749467 | 1770141 | 20675 | Silicibacter pomeroyi DSS-3, complete genome | 0 | 1689 | BLASTN svg | BLASTP svg |
| NC_003911:3864852* | 3864852 | 3898296 | 33445 | Silicibacter pomeroyi DSS-3, complete genome | 0 | 710 | BLASTN svg | BLASTP svg |
| NC_003911:1791878* | 1791878 | 1852654 | 60777 | Silicibacter pomeroyi DSS-3, complete genome | 3e-123 | 450 | BLASTN svg | BLASTP svg |
| NC_015376:1185000 | 1185000 | 1204562 | 19563 | Burkholderia gladioli BSR3 chromosome chromosome 2, complete | 1e-36 | 163 | BLASTN svg | BLASTP svg |
| NC_008686:50750* | 50750 | 77324 | 26575 | Paracoccus denitrificans PD1222 chromosome 1, complete sequence | 1e-36 | 163 | BLASTN svg | BLASTP svg |
| NC_009007:57804 | 57804 | 82302 | 24499 | Rhodobacter sphaeroides 2.4.1 plasmid A, partial sequence | 7e-35 | 157 | BLASTN svg | BLASTP svg |
| NC_009720:750612 | 750612 | 784223 | 33612 | Xanthobacter autotrophicus Py2, complete genome | 7e-32 | 147 | BLASTN svg | BLASTP svg |
| NC_008687:229941 | 229941 | 255099 | 25159 | Paracoccus denitrificans PD1222 chromosome 2, complete sequence | 2e-29 | 139 | BLASTN svg | BLASTP svg |
| NC_014532:2066074 | 2066074 | 2090607 | 24534 | Halomonas elongata DSM 2581, complete genome | 1e-21 | 113 | BLASTN svg | BLASTP svg |
| NC_007925:4060635* | 4060635 | 4088224 | 27590 | Rhodopseudomonas palustris BisB18, complete genome | 1e-17 | 99.6 | BLASTN svg | BLASTP svg |
| NC_006569:370846 | 370846 | 390134 | 19289 | Silicibacter pomeroyi DSS-3 megaplasmid, complete sequence | 6e-17 | 97.6 | BLASTN svg | BLASTP svg |
| NC_009720:2143124* | 2143124 | 2167629 | 24506 | Xanthobacter autotrophicus Py2, complete genome | 2e-16 | 95.6 | BLASTN svg | BLASTP svg |
| NC_007953:1434705 | 1434705 | 1458122 | 23418 | Burkholderia xenovorans LB400 chromosome 3, complete sequence | 6e-14 | 87.7 | BLASTN svg | BLASTP svg |
| NC_009956:88354 | 88354 | 117893 | 29540 | Dinoroseobacter shibae DFL 12 plasmid pDSHI02, complete sequence | 3e-12 | 81.8 | BLASTN svg | BLASTP svg |
| NC_010501:3448389 | 3448389 | 3478374 | 29986 | Pseudomonas putida W619, complete genome | 5e-11 | 77.8 | BLASTN svg | BLASTP svg |
| NC_003911:633393* | 633393 | 660261 | 26869 | Silicibacter pomeroyi DSS-3, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_009050:212270* | 212270 | 280839 | 68570 | Rhodobacter sphaeroides ATCC 17029 chromosome 2, complete sequence | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_020911:2998000* | 2998000 | 3042099 | 44100 | Octadecabacter antarcticus 307, complete genome | 1e-08 | 69.9 | BLASTN svg | BLASTP svg |
| NC_009720:622262 | 622262 | 655802 | 33541 | Xanthobacter autotrophicus Py2, complete genome | 5e-08 | 67.9 | BLASTN svg | BLASTP svg |
| NC_020911:349610* | 349610 | 372599 | 22990 | Octadecabacter antarcticus 307, complete genome | 2e-07 | 65.9 | BLASTN svg | BLASTP svg |
| NC_011958:53426* | 53426 | 76099 | 22674 | Rhodobacter sphaeroides KD131 chromosome 2, complete genome | 8e-07 | 63.9 | BLASTN svg | BLASTP svg |