Pre_GI: BLASTN Hits

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Query: NC_002953:998944 Staphylococcus aureus subsp. aureus MSSA476, complete genome

Start: 998944, End: 1017163, Length: 18220

Host Lineage: Staphylococcus aureus; Staphylococcus; Staphylococcaceae; Bacillales; Firmicutes; Bacteria

General Information: This strain is a hyper-virulent community acquired methicillin-susceptible (MSSA) strain isolated in the United Kingdom. Causes skin infections. Staphylcocci are generally found inhabiting the skin and mucous membranes of mammals and birds. Some members of this genus can be found as human commensals and these are generally believed to have the greatest pathogenic potential in opportunistic infections. This organism is a major cause of nosocomial (hospital-acquired) and community-acquired infections. Continues to be a major cause of mortality and is responsible for a variety of infections including, boils, furuncles, styes, impetigo and other superficial skin infections in humans. Also known to cause more serious infections particularly in the chronically ill or immunocompromised. The ability to cause invasive disease is associated with persistance in the nasal cavity of a host.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010079:15643271564327160887644550Staphylococcus aureus subsp. aureus USA300_TCH1516, complete06752BLASTN svgBLASTP svg
NC_007793:15484771548477156806219586Staphylococcus aureus subsp. aureus USA300, complete genome06752BLASTN svgBLASTP svg
NC_007795:14663181466318148600719690Staphylococcus aureus subsp. aureus NCTC 8325, complete genome06570BLASTN svgBLASTP svg
NC_002951:35102935102938944738419Staphylococcus aureus subsp. aureus COL, complete genome06562BLASTN svgBLASTP svg
NC_003923:15335001533500155786524366Staphylococcus aureus subsp. aureus MW2, complete genome06538BLASTN svgBLASTP svg
NC_002952:15920001592000162211730118Staphylococcus aureus subsp. aureus MRSA252, complete genome06474BLASTN svgBLASTP svg
NC_020164:16774521677452171150734056Staphylococcus warneri SG1, complete genome01243BLASTN svgBLASTP svg
NC_007793:15744561574456159486920414Staphylococcus aureus subsp. aureus USA300, complete genome4e-128466BLASTN svgBLASTP svg
NC_007168:18393821839382185725517874Staphylococcus haemolyticus JCSC1435, complete genome7e-59236BLASTN svgBLASTP svg
NC_014925:13145701314570133846423895Staphylococcus pseudintermedius HKU10-03 chromosome, complete1e-50208BLASTN svgBLASTP svg
NC_012121:47414447414450609331950Staphylococcus carnosus subsp. carnosus TM300, complete genome9e-46192BLASTN svgBLASTP svg
NC_004668:29541729541731392418508Enterococcus faecalis V583, complete genome1e-1385.7BLASTN svgBLASTP svg
NC_007929:785875*78587581097825104Lactobacillus salivarius subsp. salivarius UCC118, complete genome9e-0969.9BLASTN svgBLASTP svg
NC_014551:86525486525490653841285Bacillus amyloliquefaciens DSM 7, complete genome8e-0660BLASTN svgBLASTP svg