Query: NC_002936:1004570 Dehalococcoides ethenogenes 195, complete genome
Start: 1004570, End: 1023262, Length: 18693
Host Lineage: Dehalococcoides mccartyi; Dehalococcoides; Dehalococcoidaceae; Dehalococcoidales; Chloroflexi; Bacteria
General Information: Dechlorinates tetrachloroethene. This organism was isolated from environments contaminated with organic chlorinated chemicals such as tetrachloroethene (PCE) and trichloroethane (TCE), common contaminants in the anaerobic subsurface. There are at least 15 organisms from different metabolic groups, halorespirators, acetogens, methanogens and facultative anaerobes, that are able to metabolize PCE. Some of these organisms couple dehalogenation to energy conservation and utilize PCE as the only source of energy while others dehalogenate tetrachloroethene fortuitously. This non-methanogenic, non-acetogenic culture is able to grow with hydrogen as the electron donor, indicating that hydrogen/PCE serves as an electron donor/acceptor for energy conservation and growth. This organism can only grow anaerobically in the presence of hydrogen as an electron donor and chlorinated compounds as electron acceptors. Dehalococcoides ethenogenes is typically found at sites contaminated with chlorinated solvents, and have been independently isolated in dozens of sites across the USA.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
---|
NC_012778:1573847 | 1573847 | 1601199 | 27353 | Eubacterium eligens ATCC 27750, complete genome | 1e-63 | 252 | BLASTN svg | BLASTP svg |
NC_014915:1331459* | 1331459 | 1355606 | 24148 | Geobacillus sp. Y412MC52 chromosome, complete genome | 1e-26 | 129 | BLASTN svg | BLASTP svg |
NC_013411:2191514* | 2191514 | 2215662 | 24149 | Geobacillus sp. Y412MC61, complete genome | 1e-26 | 129 | BLASTN svg | BLASTP svg |
NC_007519:1782067* | 1782067 | 1818404 | 36338 | Desulfovibrio alaskensis G20 chromosome, complete genome | 4e-23 | 117 | BLASTN svg | BLASTP svg |
NC_010831:1224000 | 1224000 | 1253177 | 29178 | Chlorobium phaeobacteroides BS1, complete genome | 2e-22 | 115 | BLASTN svg | BLASTP svg |
NC_008054:1030994* | 1030994 | 1061519 | 30526 | Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842, complete | 4e-20 | 107 | BLASTN svg | BLASTP svg |
NC_009434:3434381* | 3434381 | 3464115 | 29735 | Pseudomonas stutzeri A1501, complete genome | 2e-19 | 105 | BLASTN svg | BLASTP svg |
NC_010170:4463000 | 4463000 | 4511769 | 48770 | Bordetella petrii, complete genome | 4e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_008609:206313 | 206313 | 246721 | 40409 | Pelobacter propionicus DSM 2379, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_004431:5123325 | 5123325 | 5149090 | 25766 | Escherichia coli CFT073, complete genome | 4e-14 | 87.7 | BLASTN svg | BLASTP svg |
NC_010655:1808657* | 1808657 | 1827803 | 19147 | Akkermansia muciniphila ATCC BAA-835, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_008786:3845988 | 3845988 | 3872188 | 26201 | Verminephrobacter eiseniae EF01-2, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_010002:4572573* | 4572573 | 4618583 | 46011 | Delftia acidovorans SPH-1, complete genome | 6e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_015635:3860570* | 3860570 | 3891855 | 31286 | Microlunatus phosphovorus NM-1, complete genome | 2e-12 | 81.8 | BLASTN svg | BLASTP svg |
NC_013204:989103 | 989103 | 1012099 | 22997 | Eggerthella lenta DSM 2243, complete genome | 6e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_011666:2109274* | 2109274 | 2139111 | 29838 | Methylocella silvestris BL2, complete genome | 2e-09 | 71.9 | BLASTN svg | BLASTP svg |
NC_010170:4409683 | 4409683 | 4435297 | 25615 | Bordetella petrii, complete genome | 9e-09 | 69.9 | BLASTN svg | BLASTP svg |
NC_002927:960369* | 960369 | 991599 | 31231 | Bordetella bronchiseptica RB50, complete genome | 1e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_013124:1439915* | 1439915 | 1466705 | 26791 | Acidimicrobium ferrooxidans DSM 10331, complete genome | 9e-06 | 60 | BLASTN svg | BLASTP svg |