Pre_GI: BLASTN Hits

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Query: NC_001263:132288 Deinococcus radiodurans R1 chromosome 1, complete sequence

Start: 132288, End: 158962, Length: 26675

Host Lineage: Deinococcus radiodurans; Deinococcus; Deinococcaceae; Deinococcales; Deinococcus-Thermus; Bacteria

General Information: This red-pigmented organism's name means "strange berry that withstands radiation", marking the fact that this organism is one of the most radiation-resistant known. It can tolerate radiation levels at 1000 times the levels that would kill a human and it was originally isolated in 1956 from a can of meat that had been irradiated with X-rays. The resistance to radiation may reflect its resistance to dessication, which also causes DNA damage. This organism may be of use in cleaning up toxic metals found at nuclear weapons production sites due to the radiation resistance. This bacterium is also a highly efficient transformer, and can readily take up exogenous DNA from the environment, which may also aid DNA repair. This organism carries multiple copies of many DNA repair genes, suggesting a robust system for dealing with DNA damage. The recombination system may rely on multiple copies of various repeat elements found throughout the genome.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015161:523278*52327854807924802Deinococcus proteolyticus MRP chromosome, complete genome01033BLASTN svgBLASTP svg
NC_015161:792955*79295581709624142Deinococcus proteolyticus MRP chromosome, complete genome01019BLASTN svgBLASTP svg
NC_015161:162000*16200018601224013Deinococcus proteolyticus MRP chromosome, complete genome3e-86327BLASTN svgBLASTP svg
NC_001263:243000*24300026750924510Deinococcus radiodurans R1 chromosome 1, complete sequence2e-26129BLASTN svgBLASTP svg
NC_015161:19966619966622159921934Deinococcus proteolyticus MRP chromosome, complete genome6e-23117BLASTN svgBLASTP svg
NC_008570:11435781143578119109947522Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome4e-18101BLASTN svgBLASTP svg
NC_014761:1715377*1715377173823422858Oceanithermus profundus DSM 14977 chromosome, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_014831:65408*654088880223395Thermaerobacter marianensis DSM 12885 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_008340:420126*42012644865428529Alkalilimnicola ehrlichei MLHE-1, complete genome9e-1383.8BLASTN svgBLASTP svg
NC_005085:2869159*2869159289234223184Chromobacterium violaceum ATCC 12472, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_003888:2814360*2814360285868544326Streptomyces coelicolor A3(2), complete genome3e-1281.8BLASTN svgBLASTP svg
NC_001263:66266666266668995627291Deinococcus radiodurans R1 chromosome 1, complete sequence3e-1281.8BLASTN svgBLASTP svg
NC_012559:10648211064821109367428854Laribacter hongkongensis HLHK9, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_019902:29437192943719296733623618Thioalkalivibrio nitratireducens DSM 14787, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_019940:20371820371822463220915Thioflavicoccus mobilis 8321 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_015556:4074367*4074367410534530979Pseudomonas fulva 12-X chromosome, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_012721:770651*77065183681366163Burkholderia glumae BGR1 chromosome 2, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_015690:25538372553837257509921263Paenibacillus mucilaginosus KNP414 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014960:3009500*3009500302719917700Anaerolinea thermophila UNI-1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008781:3365468*3365468340127235805Polaromonas naphthalenivorans CJ2, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008025:2407618*2407618243033022713Deinococcus geothermalis DSM 11300, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015424:35207833520783357390853126Aeromonas veronii B565 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_021177:2451000*2451000247327922280Streptomyces fulvissimus DSM 40593, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_015846:790374*79037481424523872Capnocytophaga canimorsus Cc5 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012724:82983082983085458124752Burkholderia glumae BGR1 chromosome 1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011146:16997021699702171959919898Geobacter bemidjiensis Bem, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007498:1666242*1666242169184325602Pelobacter carbinolicus DSM 2380, complete genome3e-0661.9BLASTN svgBLASTP svg