Query: NC_000907:1568867 Haemophilus influenzae Rd KW20, complete genome
Start: 1568867, End: 1603753, Length: 34887
Host Lineage: Haemophilus influenzae; Haemophilus; Pasteurellaceae; Pasteurellales; Proteobacteria; Bacteria
General Information: Small, nonmotile, Gram-negative bacterium whose only natural host is human. It lacks an important fimbrial gene cluster that is important for virulence as compared to type b strains and was the first microbe to ever be sequenced. A group of organisms that are either obligate parasites or commensal organisms found in animal mucous membranes. Almost all species require the presence of important growth factors found in the blood of their hosts, including either X factor (protoporphyrin IX or heme) or V factor (nicotinamide adenine dinucleotide (NAD or NADP)). This organism was first isolated in the 1890s during an influenza pandemic by Pfeiffer, and was originally thought to be the source of influenza, although later it was shown to be a secondary pathogen and may be synergistic with the influenza virus. This bacterium is one of the leading causes of meningitis in young children, and it may also cause septicemia, otitis media (inflammation of the middle ear), sinusitis (inflammation of the sinus cavity) and chronic bronchitis. It is highly adapted to its human host and typically lives in the nasopharynx and is a major cause of lower respiratory infections in infants and small children in developing countries (type 1b strain), although vaccine use has resulted in the decline of infections. The encapsulated organism can penetrate the blood and avoid both phagocytosis and complement-mediated lysis. All known strains produce neuraminidase and an IgA protease as well as fimbrial adhesins for attachment.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_013416:1526920 | 1526920 | 1545636 | 18717 | Aggregatibacter actinomycetemcomitans D11S-1, complete genome | 5e-98 | 367 | BLASTN svg | BLASTP svg |
NC_013416:1588369 | 1588369 | 1612188 | 23820 | Aggregatibacter actinomycetemcomitans D11S-1, complete genome | 4e-46 | 194 | BLASTN svg | BLASTP svg |
NC_002940:78392 | 78392 | 97457 | 19066 | Haemophilus ducreyi 35000HP, complete genome | 6e-30 | 141 | BLASTN svg | BLASTP svg |
NC_007520:407627 | 407627 | 430346 | 22720 | Thiomicrospira crunogena XCL-2, complete genome | 2e-11 | 79.8 | BLASTN svg | BLASTP svg |
AC_000091:3180275 | 3180275 | 3199621 | 19347 | Escherichia coli W3110 DNA, complete genome | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
NC_000913:3176000* | 3176000 | 3198987 | 22988 | Escherichia coli K12, complete genome | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
NC_009800:3224575* | 3224575 | 3245216 | 20642 | Escherichia coli HS, complete genome | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
NC_010468:694943 | 694943 | 719142 | 24200 | Escherichia coli ATCC 8739, complete genome | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
NC_010473:3273882* | 3273882 | 3296732 | 22851 | Escherichia coli str. K-12 substr. DH10B, complete genome | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
NC_011750:3683760 | 3683760 | 3706134 | 22375 | Escherichia coli IAI39 chromosome, complete genome | 1e-09 | 73.8 | BLASTN svg | BLASTP svg |
NC_004461:1* | 1 | 44069 | 44069 | Staphylococcus epidermidis ATCC 12228, complete genome | 2e-08 | 69.9 | BLASTN svg | BLASTP svg |
NC_014228:3282500 | 3282500 | 3323599 | 41100 | Xenorhabdus nematophila ATCC 19061, complete genome | 3e-07 | 65.9 | BLASTN svg | BLASTP svg |
NC_015424:1987964 | 1987964 | 2010707 | 22744 | Aeromonas veronii B565 chromosome, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_010611:3771778 | 3771778 | 3794099 | 22322 | Acinetobacter baumannii ACICU, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
NC_010611:240839 | 240839 | 272257 | 31419 | Acinetobacter baumannii ACICU, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
CU928160:3263248 | 3263248 | 3283315 | 20068 | Escherichia coli IAI1 chromosome, complete genome | 1e-06 | 63.9 | BLASTN svg | BLASTP svg |
CP002185:3393813* | 3393813 | 3415860 | 22048 | Escherichia coli W, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
CP002516:693703 | 693703 | 713891 | 20189 | Escherichia coli KO11, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
CU928145:3529930 | 3529930 | 3550578 | 20649 | Escherichia coli 55989 chromosome, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_009654:3215205* | 3215205 | 3245679 | 30475 | Marinomonas sp. MWYL1, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_009801:3511444 | 3511444 | 3529325 | 17882 | Escherichia coli E24377A, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_011748:3529930 | 3529930 | 3550578 | 20649 | Escherichia coli 55989, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
AP010958:3787991 | 3787991 | 3810701 | 22711 | Escherichia coli O103:H2 str. 12009 DNA, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |