Pre_GI: BLASTN Hits

Some Help

Query: NC_000907:1568867 Haemophilus influenzae Rd KW20, complete genome

Start: 1568867, End: 1603753, Length: 34887

Host Lineage: Haemophilus influenzae; Haemophilus; Pasteurellaceae; Pasteurellales; Proteobacteria; Bacteria

General Information: Small, nonmotile, Gram-negative bacterium whose only natural host is human. It lacks an important fimbrial gene cluster that is important for virulence as compared to type b strains and was the first microbe to ever be sequenced. A group of organisms that are either obligate parasites or commensal organisms found in animal mucous membranes. Almost all species require the presence of important growth factors found in the blood of their hosts, including either X factor (protoporphyrin IX or heme) or V factor (nicotinamide adenine dinucleotide (NAD or NADP)). This organism was first isolated in the 1890s during an influenza pandemic by Pfeiffer, and was originally thought to be the source of influenza, although later it was shown to be a secondary pathogen and may be synergistic with the influenza virus. This bacterium is one of the leading causes of meningitis in young children, and it may also cause septicemia, otitis media (inflammation of the middle ear), sinusitis (inflammation of the sinus cavity) and chronic bronchitis. It is highly adapted to its human host and typically lives in the nasopharynx and is a major cause of lower respiratory infections in infants and small children in developing countries (type 1b strain), although vaccine use has resulted in the decline of infections. The encapsulated organism can penetrate the blood and avoid both phagocytosis and complement-mediated lysis. All known strains produce neuraminidase and an IgA protease as well as fimbrial adhesins for attachment.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013416:15269201526920154563618717Aggregatibacter actinomycetemcomitans D11S-1, complete genome5e-98367BLASTN svgBLASTP svg
NC_013416:15883691588369161218823820Aggregatibacter actinomycetemcomitans D11S-1, complete genome4e-46194BLASTN svgBLASTP svg
NC_002940:78392783929745719066Haemophilus ducreyi 35000HP, complete genome6e-30141BLASTN svgBLASTP svg
NC_007520:40762740762743034622720Thiomicrospira crunogena XCL-2, complete genome2e-1179.8BLASTN svgBLASTP svg
AC_000091:31802753180275319962119347Escherichia coli W3110 DNA, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_000913:3176000*3176000319898722988Escherichia coli K12, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_009800:3224575*3224575324521620642Escherichia coli HS, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_010468:69494369494371914224200Escherichia coli ATCC 8739, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_010473:3273882*3273882329673222851Escherichia coli str. K-12 substr. DH10B, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_011750:36837603683760370613422375Escherichia coli IAI39 chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_004461:1*14406944069Staphylococcus epidermidis ATCC 12228, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_014228:32825003282500332359941100Xenorhabdus nematophila ATCC 19061, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_015424:19879641987964201070722744Aeromonas veronii B565 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010611:37717783771778379409922322Acinetobacter baumannii ACICU, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010611:24083924083927225731419Acinetobacter baumannii ACICU, complete genome1e-0663.9BLASTN svgBLASTP svg
CU928160:32632483263248328331520068Escherichia coli IAI1 chromosome, complete genome1e-0663.9BLASTN svgBLASTP svg
CP002185:3393813*3393813341586022048Escherichia coli W, complete genome4e-0661.9BLASTN svgBLASTP svg
CP002516:69370369370371389120189Escherichia coli KO11, complete genome4e-0661.9BLASTN svgBLASTP svg
CU928145:35299303529930355057820649Escherichia coli 55989 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_009654:3215205*3215205324567930475Marinomonas sp. MWYL1, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_009801:35114443511444352932517882Escherichia coli E24377A, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_011748:35299303529930355057820649Escherichia coli 55989, complete genome4e-0661.9BLASTN svgBLASTP svg
AP010958:37879913787991381070122711Escherichia coli O103:H2 str. 12009 DNA, complete genome4e-0661.9BLASTN svgBLASTP svg