Pre_GI: BLASTP Hits

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Query: NC_020134:2237421:2246196 Clostridium stercorarium subsp. stercorarium DSM 8532, complete

Start: 2246196, End: 2246513, Length: 318

Host Lineage: Clostridium stercorarium; Clostridium; unclassified Ruminococcaceae; Clostridiales; Firmicutes; Bacteria

General Information: Lignocellulosic biomass has great potential as an abundant and renewable source of fermentable sugars through enzymic saccharification. Clostridium stercorarium is a catabolically versatile bacterium producing a wide range of hydrolases for degradation of biomass. Together with Clostridium thermocellum, Clostridium aldrichii and other cellulose degraders, it forms group I of the clostridia. It is moderately thermophilic, with an optimum growth temperature of 65 degrees C, and has repeatedly been isolated from self-heated compost. The two-component cellulase system of C. stercorarium has been investigated thoroughly. Due to its ability to utilize the various polysaccharides present in biomass it is especially suited for the fermentation of hemicellulose to organic solvents. Some isolates have been used in Japan in a single-step ethanol-fermenting pilot-process with lignocellulosic biomass as substrate.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010718:2513917:251391725139172514207291Natranaerobius thermophilus JW/NM-WN-LF, complete genomeflagellar biosynthesis protein1e-0858.5
NC_009922:2672396:268164226816422681938297Alkaliphilus oremlandii OhILAs, complete genomeflagellar biosynthesis protein3e-0857.4
NC_020304:3447847:346501234650123465296285Desulfocapsa sulfexigens DSM 10523, complete genomeuncharacterized protein, cytoplasmic domain of flagellar protein FhlB like protein5e-0856.6
NC_012781:2148478:215338621533862153697312Eubacterium rectale ATCC 33656, complete genomeflagellar biosynthesis6e-0856.2
UCMB5137:1159520:117930311793031179584282Bacillus atrophaeus UCMB-5137BATR1942_05835; putative flagellar biosynthesis protein;(location [1138277:1138559] strand +); from Bacillusatrophaeus 1942, complete genome. [CP002203e-0754.3
NC_010382:1607013:162805416280541628356303Lysinibacillus sphaericus C3-41, complete genomeflagellar biosynthesis protein7e-0752.8
NC_019978:875941:878764878764879030267Halobacteroides halobius DSM 5150, complete genomeuncharacterized protein, cytoplasmic domain of flagellar protein FhlB like protein8e-0752.4
NC_017187:1305805:132457613245761324860285Arcobacter butzleri ED-1, complete genomeFlhB domain-containing protein8e-0752.4
NC_014483:1973233:198795919879591988258300Paenibacillus polymyxa E681 chromosome, complete genomeFhlB domain-containing protein1e-0651.6
NC_012438:1600534:160368416036841603947264Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genomeflagellar biosynthetic protein FlhB2e-0651.6
NC_009848:1542978:156040815604081560683276Bacillus pumilus SAFR-032, complete genomeflagellar biosynthesis protein FlhB2e-0651.2
NC_008593:1103293:1122918112291811246451728Clostridium novyi NT, complete genomeflagellar biosynthetic protein FlhB3e-0650.8
NC_014758:1573023:158862415886241588887264Calditerrivibrio nitroreducens DSM 19672 chromosome, completetype iii secretion exporter6e-0649.7
NC_014376:3671441:369053336905333690880348Clostridium saccharolyticum WM1 chromosome, complete genometype III secretion exporter9e-0648.9