Pre_GI: BLASTP Hits

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Query: NC_018080:6048516:6080885 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 6080885, End: 6081700, Length: 816

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004129:4596040:459730445973044598182879Pseudomonas fluorescens Pf-5, complete genomesterol desaturase family protein, putative6e-33141
NC_010162:2469915:249091824909182491817900Sorangium cellulosum 'So ce 56', complete genomehypothetical protein6e-21101
NC_010162:3177324:318202431820243182932909Sorangium cellulosum 'So ce 56', complete genomehypothetical protein3e-1892
NC_014931:4490526:449052644905264491473948Variovorax paradoxus EPS chromosome, complete genomefatty acid hydroxylase1e-0653.9
NC_017030:8599515:8606441860644186076881248Corallococcus coralloides DSM 2259 chromosome, complete genomehypothetical protein1e-0653.5
NC_018748:1400068:140109314010931402079987Emticicia oligotrophica DSM 17448 chromosome, complete genomefatty acid hydroxylase4e-0652.4