Pre_GI: BLASTP Hits

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Query: NC_018080:6048516:6048516 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 6048516, End: 6049430, Length: 915

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010682:1:126741267413633960Ralstonia pickettii 12J chromosome 1, complete sequenceFimbrial protein1e-38160
NC_012856:1:132721327214231960Ralstonia pickettii 12D chromosome 1, complete genomeFimbrial protein3e-38159
NC_012721:1052883:1064182106418210653301149Burkholderia glumae BGR1 chromosome 2, complete genomeType-1 fimbrial protein, A subunit5e-1065.5
NC_013446:2961647:298617629861762987117942Comamonas testosteroni CNB-2, complete genomeFimbrial protein6e-1065.1
NC_009792:4693152:4701169470116947022541086Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein2e-0963.2
NC_008321:2649781:267972326797232680718996Shewanella sp. MR-4, complete genomeFimbrial protein7e-0755.1
NC_010322:1623599:1623599162359916246811083Pseudomonas putida GB-1 chromosome, complete genomefimbrial protein1e-0653.9