Pre_GI: BLASTP Hits

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Query: NC_018080:5091772:5128705 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 5128705, End: 5129784, Length: 1080

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009656:4527457:4609300460930046103791080Pseudomonas aeruginosa PA7 chromosome, complete genometype IV B pilus protein0689
NC_008463:5246954:5283717528371752847961080Pseudomonas aeruginosa UCBPP-PA14, complete genometype IV B pilus Protein0687
NC_004129:5373886:5406087540608754072531167Pseudomonas fluorescens Pf-5, complete genomeintegral membrane protein, putative6e-69261
NC_005126:2063667:2077196207719620782931098Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein4e-49195
NC_005126:1223042:1234512123451212355971086Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein1e-43177
NC_009708:4182460:4204699420469942057991101Yersinia pseudotuberculosis IP 31758 chromosome, complete genometype IV pilus biogenesis protein PilR3e-40166
NC_007507:11000:1735117351184481098Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,putative PilR-like integral membrane protein2e-38159
NC_007950:185500:1985251985251995981074Polaromonas sp. JS666 plasmid 2, complete sequencetype II secretion system protein3e-33142
NC_012214:3502992:3511151351115135122601110Erwinia pyrifoliae Ep1/96, complete genometype IV pilus integral membrane protein2e-32140
NC_015850:1155376:1179517117951711806171101Acidithiobacillus caldus SM-1 chromosome, complete genomeintegral membrane protein2e-29130
NC_012751:942315:9459009459009469641065Candidatus Hamiltonella defensa 5AT (Acyrthosiphon pisum), completePilR type IV pilus biosynthesis protein2e-22107
NC_004547:611178:6111786111786122151038Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative Type IV pilus protein3e-1893.2
NC_010682:1624985:1630239163023916313121074Ralstonia pickettii 12J chromosome 1, complete sequencetype II secretion system protein5e-1892
NC_017047:4379989:4392990439299043940361047Rahnella aquatilis HX2 chromosome, complete genometype II secretion system F domain-containing protein1e-1687.8
NC_015061:4286000:4299104429910443001501047Rahnella sp. Y9602 chromosome, complete genomeType II secretion system F domain protein1e-1687.8
NC_014618:1040381:1059494105949410605191026Enterobacter cloacae SCF1 chromosome, complete genometype II secretion system F domain-containing protein3e-1582.8
NC_020063:528296:5427715427715438051035Enterobacteriaceae bacterium strain FGI 57, complete genometype II secretory pathway, component PulF4e-1582.4
NC_018643:754104:7717857717857730741290Alpha proteobacterium HIMB5 chromosome, complete genomeGSPII F domain-containing protein4e-0756.2
NC_016612:2902628:2938204293820429394241221Klebsiella oxytoca KCTC 1686 chromosome, complete genomegeneral secretion pathway protein F9e-0651.6