Pre_GI: BLASTP Hits

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Query: NC_018080:5091772:5123690 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 5123690, End: 5125264, Length: 1575

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009656:4527457:4604150460415046058591710Pseudomonas aeruginosa PA7 chromosome, complete genometype IVB pilus formation outer membrane protein0910
NC_008463:5246954:5278639527863952802761638Pseudomonas aeruginosa UCBPP-PA14, complete genomeType IV B pilus protein0906
NC_007005:1705406:1703673170367317054091737Pseudomonas syringae pv. syringae B728a, complete genometype II and III secretion system protein8e-116417
NC_004129:5373886:5400859540085954027001842Pseudomonas fluorescens Pf-5, complete genometype IV pilus protein, PilN4e-98358
NC_007507:11000:1213112131138671737Xanthomonas campestris pv. vesicatoria str. 85-10 plasmid pXCV183,putative PilN-like Bacterial type II and III secretion system protein1e-67257
NC_005126:2063667:2072176207217620737801605Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein4e-58226
NC_012214:3502992:3515553351555335171991647Erwinia pyrifoliae Ep1/96, complete genomeType IVB pilus formation outer membrane protein4e-52206
NC_007950:185500:2030782030782047481671Polaromonas sp. JS666 plasmid 2, complete sequencetype II and III secretion system protein1e-48194
NC_004547:590844:6060136060136076771665Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeputative Type IV pilus protein1e-43178
NC_015850:1155376:1174104117410411757381635Acidithiobacillus caldus SM-1 chromosome, complete genomePilN5e-29129
NC_010682:1624985:1624985162498516266761692Ralstonia pickettii 12J chromosome 1, complete sequencePilN4e-1686.7
NC_008757:77023:1034111034111050331623Polaromonas naphthalenivorans CJ2 plasmid pPNAP01, completelipoprotein1e-1481.6
NC_016616:2699350:2742273274227327439941722Dechlorosoma suillum PS chromosome, complete genometype II secretory pathway, component PulD4e-1376.6
NC_010087:265625:2661822661822677861605Burkholderia multivorans ATCC 17616 chromosome 3, completetype II secretory pathway component PulD-like protein2e-1171.2
NC_008789:350650:3723233723233739391617Halorhodospira halophila SL1, complete genomepilus (MSHA type) biogenesis protein MshL9e-1168.9
NC_015185:1414453:1441743144174314432631521Desulfurobacterium thermolithotrophum DSM 11699 chromosome,type II and III secretion system protein1e-0758.2
NC_014972:3688000:3697159369715936989191761Desulfobulbus propionicus DSM 2032 chromosome, complete genometype II and III secretion system protein4e-0653.5