Pre_GI: BLASTP Hits

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Query: NC_018080:3055358:3069918 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 3069918, End: 3070208, Length: 291

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011662:2402408:242554624255462425836291Thauera sp. MZ1T, complete genomeDNA polymerase beta domain protein region3e-36150
NC_008786:1553833:156668015666801566970291Verminephrobacter eiseniae EF01-2, complete genomeDNA polymerase, beta domain protein region3e-35146
NC_015388:2143329:214871221487122149002291Desulfobacca acetoxidans DSM 11109 chromosome, complete genomeDNA polymerase beta domain protein region3e-29126
NC_019902:3397170:341912934191293419419291Thioalkalivibrio nitratireducens DSM 14787, complete genomeDNA polymerase beta domain-containing protein3e-24110
NC_004349:3938:160751607516365291Shewanella oneidensis MR-1 plasmid pMR-1, complete sequenceISSo9, nucleotidyltransferase domain protein9e-2095.5
NC_007950:109399:118275118275118571297Polaromonas sp. JS666 plasmid 2, complete sequenceDNA polymerase, beta-like region6e-1786.3
NC_019902:1:146151461514905291Thioalkalivibrio nitratireducens DSM 14787, complete genomeputative nucleotidyltransferase3e-1684
NC_013889:1159343:117613411761341176424291Thioalkalivibrio sp. K90mix chromosome, complete genomeDNA polymerase beta domain protein region7e-1372.8
NC_016112:1330500:134385913438591344152294Methylomicrobium alcaliphilum chromosome, complete genomeDNA polymerase beta domain-containing protein region6e-0959.7
NC_015572:2186394:219501521950152195308294Methylomonas methanica MC09 chromosome, complete genomeDNA polymerase beta domain-containing protein5e-0856.2
NC_013530:1649214:166786416678641668301438Xylanimonas cellulosilytica DSM 15894, complete genometranscriptional regulator, XRE family1e-0651.6
NC_007643:1781723:178602517860251786315291Rhodospirillum rubrum ATCC 11170, complete genomeISSo9, nucleotidyltransferase domain protein3e-0650.8
NC_014484:1690272:169491316949131695203291Spirochaeta thermophila DSM 6192 chromosome, complete genomehypothetical protein3e-0650.8
NC_016025:596670:598068598068598358291Candidatus Chloracidobacterium thermophilum B chromosome chromosomeputative nucleotidyltransferase4e-0650.1