Pre_GI: BLASTP Hits

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Query: NC_018080:3055358:3061010 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 3061010, End: 3062614, Length: 1605

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008697:55406:6122561225628261602Nocardioides sp. JS614 plasmid pNOCA01, complete sequenceSMC domain protein8e-92338
NC_010612:4400260:4414512441451244161101599Mycobacterium marinum M, complete genomeATP-dependent endonuclease (old family)5e-86318
NC_007494:867901:8827498827498843471599Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequencehypothetical protein4e-75282
NC_007164:1434305:1467435146743514690661632Corynebacterium jeikeium K411, complete genomehypothetical protein9e-75281
NC_010943:2465976:2479726247972624813061581Stenotrophomonas maltophilia K279a, complete genomeputative conjugative transposon DNA recombination protein9e-70265
NC_012778:1819559:1848285184828518499911707Eubacterium eligens ATCC 27750, complete genomeputative ATP-dependent endonuclease of the OLD family3e-65249
NC_013316:2033906:2108387210838721100091623Clostridium difficile R20291, complete genomeputative conjugative transposon DNA recombination protein2e-61236
NC_009089:2150062:2166079216607921677011623Clostridium difficile 630, complete genomeputative conjugative transposon DNA recombination protein6e-61235
NC_014664:1614568:1630970163097016326011632Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomeputative ATP-dependent endonuclease of the OLD family2e-59230
NC_009089:2150062:21362292136229218593049702Clostridium difficile 630, complete genome7e-59228
NC_020829:940692:9576789576789593361659Pseudomonas denitrificans ATCC 13867, complete genomeconjugative transposon DNA recombination protein3e-50199
NC_013132:3704288:3728136372813637296981563Chitinophaga pinensis DSM 2588, complete genomehypothetical protein5e-38159
NC_010524:2117347:2124287212428721258551569Leptothrix cholodnii SP-6, complete genomehypothetical protein1e-37157
NC_010645:369408:3822983822983838661569Bordetella avium 197N, complete genomehypothetical protein1e-37157
NC_016826:929259:9410099410099425981590Streptococcus infantarius subsp. infantarius CJ18 chromosome,putative ATP-dependentend nuclease of the OLD family3e-33143
NC_014931:724102:7362577362577378221566Variovorax paradoxus EPS chromosome, complete genomehypothetical protein2e-32140
NC_016860:3995445:4010647401064740122121566Salmonella enterica subsp. enterica serovar Typhimurium strputative OLD family ATP-dependent endonuclease3e-31137
NC_007508:237771:261238261238261747510Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein4e-1376.6
NC_007508:237771:2630202630202640331014Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein8e-0859.3