Pre_GI: BLASTP Hits

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Query: NC_018080:3055358:3059950 Pseudomonas aeruginosa DK2 chromosome, complete genome

Start: 3059950, End: 3060927, Length: 978

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007164:1434305:1466341146634114674381098Corynebacterium jeikeium K411, complete genomehypothetical protein3e-47189
NC_007494:867901:8816778816778827621086Rhodobacter sphaeroides 2.4.1 chromosome 2, complete sequencehypothetical protein7e-47187
NC_013316:2033906:2110006211000621110731068Clostridium difficile R20291, complete genomeputative conjugative transposon hypothetical protein1e-39164
NC_009089:2150062:2167698216769821687651068Clostridium difficile 630, complete genomeputative conjugative transposon conserved hypothetical protein1e-39164
NC_008697:55406:6281362813638501038Nocardioides sp. JS614 plasmid pNOCA01, complete sequenceputative DNA helicase II / ATP-dependent DNA helicase PcrA7e-39161
NC_010612:4400260:4416097441609744171311035Mycobacterium marinum M, complete genomehelicase7e-39161
NC_010943:2465976:2481284248128424823811098Stenotrophomonas maltophilia K279a, complete genomeputative conjugative transposon conserved hypothetical protein1e-38160
NC_012778:1819559:1847185184718518482911107Eubacterium eligens ATCC 27750, complete genomeDNA helicase II / ATP-dependent DNA helicase PcrA1e-37157
NC_014664:1614568:1632598163259816337371140Rhodomicrobium vannielii ATCC 17100 chromosome, complete genomehypothetical protein1e-30134
NC_020829:940692:9593299593299605071179Pseudomonas denitrificans ATCC 13867, complete genomeDNA/RNA helicase1e-25117
NC_014931:724102:7378077378077388681062Variovorax paradoxus EPS chromosome, complete genomehypothetical protein3e-2099.4
NC_016860:3995445:4012197401219740132191023Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein3e-1582.8
NC_007508:237771:2640182640182650491032Xanthomonas campestris pv. vesicatoria str. 85-10, complete genomehypothetical protein4e-1375.9
NC_010524:2117347:2123271212327121243021032Leptothrix cholodnii SP-6, complete genomehypothetical protein1e-1170.5
NC_013132:3704288:3727123372712337281511029Chitinophaga pinensis DSM 2588, complete genomehypothetical protein2e-1170.1
NC_016826:929259:9400269400269410271002Streptococcus infantarius subsp. infantarius CJ18 chromosome,hypothetical protein7e-1065.1
NC_010645:369408:3812823812823823131032Bordetella avium 197N, complete genomehypothetical protein5e-0962