Pre_GI: BLASTP Hits

Some Help

Query: NC_017986:5421000:5430113 Pseudomonas putida ND6 chromosome, complete genome

Start: 5430113, End: 5430412, Length: 300

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009512:3118907:312573231257323126031300Pseudomonas putida F1, complete genomeHelix-turn-helix, type 11 domain protein5e-43172
NC_015733:4130000:413800741380074138693687Pseudomonas putida S16 chromosome, complete genomeDeoR family transcriptional regulator3e-38157
NC_009348:2247500:224951722495172250233717Aeromonas salmonicida subsp. salmonicida A449, complete genomeDeoR family transriptional regulator3e-24110
NC_008752:261903:277097277097277780684Acidovorax avenae subsp. citrulli AAC00-1, complete genomeHelix-turn-helix, type 11 domain protein2e-1787.4
NC_014117:442616:508243508243508986744Burkholderia sp. CCGE1002 chromosome chromosome 1, completeHelix-turn-helix type 11 domain protein5e-1579.7
NC_021066:1712905:171860317186031719292690Raoultella ornithinolytica B6, complete genomehypothetical protein2e-1478.2
NC_014963:4872883:487407348740734874783711Terriglobus saanensis SP1PR4 chromosome, complete genomehypothetical protein2e-1477.8
NC_015663:3742738:374273837427383743427690Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein5e-1476.3
NC_013283:113660:649164917147657Cronobacter turicensis plasmid pCTU1, complete sequencehypothetical protein2e-1374.7
NC_008702:3375027:338766433876643388353690Azoarcus sp. BH72, complete genomeputative transcriptional regulator, deoR-family5e-1373.2
NC_015277:3351504:337463733746373375632996Sphingobacterium sp. 21 chromosome, complete genomehelix-turn-helix, type 11 domain-containing protein6e-1269.7
NC_014834:959986:975100975100975783684Rhodopseudomonas palustris DX-1 chromosome, complete genomeDeoR family transcriptional regulator9e-1268.9
NC_007645:2049988:206178620617862062526741Hahella chejuensis KCTC 2396, complete genomepredicted transcriptional regulator3e-1167.4
NC_013406:7024149:705119870511987051689492Paenibacillus sp. Y412MC10 chromosome, complete genomeHelix-turn-helix type 11 domain-containing protein2e-1064.3
NC_013730:1572889:158489615848961585843948Spirosoma linguale DSM 74, complete genomeHelix-turn-helix type 11 domain protein2e-0961.2
NC_015856:3536441:354052335405233541248726Collimonas fungivorans Ter331 chromosome, complete genomehypothetical protein9e-0958.9
NC_010830:1038292:106250910625091063198690Candidatus Amoebophilus asiaticus 5a2, complete genomehypothetical protein4e-0857
NC_016604:5067562:509628850962885096980693Mycobacterium rhodesiae NBB3 chromosome, complete genomeputative transcriptional regulator4e-0857
NC_018515:3108755:311124831112483112186939Desulfosporosinus meridiei DSM 13257 chromosome, complete genometranscriptional regulator7e-0856.2
NC_012914:336750:336750336750337697948Paenibacillus sp. JDR-2, complete genomeHelix-turn-helix type 11 domain protein9e-0855.5
NC_003454:1889529:190538719053871906331945Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeTranscriptional regulator, DeoR family1e-0755.5
NC_016630:864601:901843901843902787945Filifactor alocis ATCC 35896 chromosome, complete genomeDeoR family transcriptional regulator2e-0754.3
NC_012470:1390285:141421814142181415117900Streptococcus equi subsp. zooepidemicus, complete genomeDNA-bind protein8e-0752.4
NC_011886:2097349:211493021149302115628699Arthrobacter chlorophenolicus A6, complete genomeHelix-turn-helix type 11 domain protein1e-0652
NC_015321:4287945:429367142936714294360690Fluviicola taffensis DSM 16823 chromosome, complete genomeregulatory protein DeoR1e-0651.6
NC_018866:2484500:249076824907682491700933Dehalobacter sp. DCA chromosome, complete genomeTranscriptional regulator, DeoR family3e-0650.4
NC_014551:2510000:253795525379552538917963Bacillus amyloliquefaciens DSM 7, complete genomehypothetical protein3e-0650.4
NC_016048:3063888:308369630836963084625930Oscillibacter valericigenes Sjm18-20, complete genomeputative DeoR family transcriptional regulator4e-0650.4
NC_006663:1:707770777412336Staphylococcus epidermidis RP62A plasmid pSERP, complete sequencetranscriptional regulator, putative5e-0649.7
NC_015172:1195782:122718012271801228112933Syntrophobotulus glycolicus DSM 8271 chromosome, complete genomehypothetical protein6e-0649.7