Pre_GI: BLASTP Hits

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Query: NC_017986:4790482:4799644 Pseudomonas putida ND6 chromosome, complete genome

Start: 4799644, End: 4801035, Length: 1392

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009512:2108686:2117851211785121192421392Pseudomonas putida F1, complete genometype III effector Hrp-dependent outer0938
NC_010552:2454776:2467655246765524690641410Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetype III effector Hrp-dependent outer2e-129462
NC_011894:2503639:2502266250226625036421377Methylobacterium nodulans ORS 2060, complete genometype III effector Hrp-dependent outers1e-72274
NC_006582:4256915:4259615425961542609521338Bacillus clausii KSM-K16, complete genomehypothetical protein4e-71269
NC_011959:131800:1368301368301381551326Thermomicrobium roseum DSM 5159, complete genomeygbK domain protein2e-63243
NC_012791:2052923:2081805208180520831691365Variovorax paradoxus S110 chromosome 1, complete genometype III effector Hrp-dependent outers6e-61235
NC_007963:3574000:3585560358556035868881329Chromohalobacter salexigens DSM 3043, complete genometype III effector Hrp-dependent outers8e-47188
NC_014364:3500041:3524744352474435260181275Spirochaeta smaragdinae DSM 11293 chromosome, complete genometype III effector Hrp-dependent outer protein1e-21104
NC_015727:1050500:1060912106091210622131302Cupriavidus necator N-1 plasmid BB1p, complete sequencehypothetical protein1e-21104
NC_003197:3005842:3059448305944830607101263Salmonella typhimurium LT2, complete genomeputative tRNA synthase2e-1997.1
NC_016810:3028421:3082009308200930832711263Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-1997.1
NC_016856:3026426:3079685307968530809471263Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative tRNA synthase2e-1997.1
NC_016857:3028421:3082009308200930832711263Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative tRNA synthase2e-1997.1
NC_016860:3029272:3082878308287830841401263Salmonella enterica subsp. enterica serovar Typhimurium strputative tRNA synthase2e-1997.1
NC_016863:2974333:3027937302793730291991263Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative tRNA synthase2e-1997.1
NC_008570:1143578:1144203114420311454531251Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomeYgbK domain protein2e-1687
NC_009801:3013838:3038216303821630394781263Escherichia coli E24377A, complete genomeYgbK domain protein3e-1687
NC_015224:2701914:2702534270253427037961263Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein3e-1686.7
NC_008800:2695977:2695977269597726972841308Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein4e-1686.3
NC_009328:3322802:3342308334230833436001293Geobacillus thermodenitrificans NG80-2 chromosome, complete genomehypothetical protein4e-1583.2
NC_020291:4305521:4315519431551943168111293Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomehypothetical protein8e-1582
NC_007503:1111457:1121419112141911227171299Carboxydothermus hydrogenoformans Z-2901, complete genomehypothetical protein1e-1481.6
NC_011283:2836000:2854876285487628561411266Klebsiella pneumoniae 342 chromosome, complete genomeYgbK domain protein1e-1481.6
NC_011283:2836000:2837948283794828392131266Klebsiella pneumoniae 342 chromosome, complete genomeYgbK domain protein1e-1481.6
NC_013850:2846069:2844811284481128460761266Klebsiella variicola At-22 chromosome, complete genometype III effector Hrp-dependent outers8e-1478.6
NC_013416:16493:1994819948211921245Aggregatibacter actinomycetemcomitans D11S-1, complete genome4-hydroxy-3-methylbut-2-enyl diphosphate reductase6e-1272.4
NC_016513:317197:3222633222633235101248Aggregatibacter actinomycetemcomitans ANH9381 chromosome, complete4-hydroxy-3-methylbut-2-enyl diphosphate reductase9e-1272
NC_013406:347995:3631693631693644641296Paenibacillus sp. Y412MC10 chromosome, complete genometype III effector Hrp-dependent outers4e-1170.1
NC_016023:1874827:1889733188973318910581326Bacillus coagulans 36D1 chromosome, complete genometype III effector Hrp-dependent outer protein3e-0963.9
NC_014964:1695000:1702196170219617034551260Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completetype III effector Hrp-dependent outer domain-containing protein7e-0962.4
NC_010321:1703000:1709983170998317112421260Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeHrp-dependent type III effector protein7e-0962.4
NC_004311:1096649:1099278109927811005371260Brucella suis 1330 chromosome II, complete sequencehypothetical protein8e-0962
NC_010104:1096081:1098710109871010999691260Brucella canis ATCC 23365 chromosome II, complete sequencehypothetical protein8e-0962
NC_015858:1150446:1153075115307511543341260Brucella pinnipedialis B2/94 chromosome chromosome 2, completehypothetical protein3e-0860.1
NC_013118:1109610:1112239111223911134981260Brucella microti CCM 4915 chromosome 2, complete genomehypothetical protein3e-0860.1
NC_003318:183914:1988721988722001281257Brucella melitensis 16M chromosome II, complete sequenceHypothetical Cytosolic Protein9e-0858.5
NC_016633:1353458:1373959137395913751941236Sphaerochaeta pleomorpha str. Grapes chromosome, complete genomehypothetical protein9e-0858.5
NC_010167:1085106:1087735108773510889941260Brucella suis ATCC 23445 chromosome II, complete sequencehypothetical protein2e-0757.8
NC_019978:1182056:1193315119331511946161302Halobacteroides halobius DSM 5150, complete genomehypothetical protein3e-0757