Pre_GI: BLASTP Hits

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Query: NC_017511:602000:612241 Neisseria gonorrhoeae TCDC-NG08107 chromosome, complete genome

Start: 612241, End: 612600, Length: 360

Host Lineage: Neisseria gonorrhoeae; Neisseria; Neisseriaceae; Neisseriales; Proteobacteria; Bacteria

General Information: One of two pathogenic Neisseria, this species causes the sexually transmitted disease (STD) gonorrhea, which is the leading reportable STD in adults in the USA. This human-specific organism colonizes and invades the mucosal surface of the urogenital epithelium, crosses the epithelial barrier, and ends up multiplying on the basement membrane. The Opa proteins are responsible for the opaque colony phenotype due to the tight junctions between adjacent Neisseria, and are also responsible for tight adherence to host cells. This organism, like Neisseria meningitidis, is also naturally competent for DNA uptake.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007947:621213:6277006277006295141815Methylobacillus flagellatus KT, complete genomeCRISPR-associated protein, CT11339e-36148
NC_015677:3685452:3694507369450736963211815Ramlibacter tataouinensis TTB310 chromosome, complete genomehypothetical protein7e-24108
NC_005085:1269787:1288515128851512902901776Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein2e-23107
NC_015976:1893076:1910590191059019123951806Sphingobium sp. SYK-6, complete genomeCRISPR-associated protein Csd12e-22104
NC_008741:15699:3562635626374251800Desulfovibrio vulgaris subsp. vulgaris DP4 plasmid pDVUL01,CRISPR-associated protein, Csd1 family8e-1682.4
NC_014364:1116439:1123463112346311252351773Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeCRISPR-associated protein, Csd1 family2e-1168.2
NC_011963:1979136:1990091199009119919411851Rhodobacter sphaeroides KD131 chromosome 1, complete sequenceCRISPR-associated protein, Csd1 family3e-1167
NC_014960:1380500:1387306138730613891951890Anaerolinea thermophila UNI-1, complete genomehypothetical protein9e-1062.4
NC_007512:1459685:1468387146838714701321746Pelodictyon luteolum DSM 273, complete genomeCRISPR-associated CT1133 family protein9e-0958.9
NC_013740:842841:8773648773648791391776Acidaminococcus fermentans DSM 20731, complete genomeCRISPR-associated protein, Csd1 family1e-0858.2
NC_009337:1448607:1456626145662614583411716Chlorobium phaeovibrioides DSM 265 chromosome, complete genomeCRISPR-associated RAMP Csd1 family protein1e-0755.1
NC_020126:9726992:9736205973620597379711767Myxococcus stipitatus DSM 14675, complete genomeCRISPR-associated RAMP Csd1 family protein3e-0753.9
NC_019968:8397:1646016460182231764Prevotella dentalis DSM 3688 chromosome 2, complete sequenceCRISPR-associated protein Cas8c/Csd1, subtype I-C/DVULG1e-0652