Pre_GI: BLASTP Hits

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Query: NC_017270:220282:219905 Vibrio cholerae LMA3984-4 chromosome chromosome I, complete

Start: 219905, End: 220285, Length: 381

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012668:368305:401694401694402074381Vibrio cholerae MJ-1236 chromosome 1, complete sequencehypothetical protein7e-70261
NC_008577:4907497:491652449165244916904381Shewanella sp. ANA-3 chromosome 1, complete sequencecapsule biosynthesis phosphatase5e-52202
NC_008321:4631866:464086946408694641270402Shewanella sp. MR-4, complete genomecapsule biosynthesis phosphatase4e-51199
NC_018145:50237:592395923959613375Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, completecapsule biosynthesis phosphatase2e-43174
NC_011751:3530954:354099035409903541430441Escherichia coli UMN026 chromosome, complete genomehypothetical protein1e-40164
NC_011144:1264871:128638712863871286761375Phenylobacterium zucineum HLK1, complete genomepredicted hydrolase (HAD superfamily)2e-39160
NC_017279:1355441:136355913635591363957399Campylobacter jejuni subsp. jejuni IA3902 chromosome, completecapsule biosynthesis phosphatase7e-38155
NC_017033:3013654:303308730330873033512426Frateuria aurantia DSM 6220 chromosome, complete genomecapsule biosynthesis phosphatase6e-38155
NC_013209:1925341:194618019461801946593414Acetobacter pasteurianus IFO 3283-01, complete genomephosphatase IIIC2e-37154
NC_017100:1929672:194716619471661947579414Acetobacter pasteurianus IFO 3283-03, complete genomephosphatase IIIC2e-37154
NC_017108:1925323:194616219461621946575414Acetobacter pasteurianus IFO 3283-12, complete genomephosphatase IIIC2e-37154
NC_017111:1925311:194615019461501946563414Acetobacter pasteurianus IFO 3283-32, complete genomephosphatase IIIC2e-37154
NC_017121:1925323:194616219461621946575414Acetobacter pasteurianus IFO 3283-07, complete genomephosphatase IIIC2e-37154
NC_017125:1929666:194716119471611947574414Acetobacter pasteurianus IFO 3283-22, complete genomephosphatase IIIC2e-37154
NC_017146:1929678:194717319471731947586414Acetobacter pasteurianus IFO 3283-26, complete genomephosphatase IIIC2e-37154
NC_017150:1833087:185392618539261854339414Acetobacter pasteurianus IFO 3283-01-42C, complete genomephosphatase IIIC2e-37154
NC_007347:767455:791958791958792356399Ralstonia eutropha JMP134 chromosome 1, complete sequencehypothetical protein3e-35146
NC_012918:1921891:193368719336871934091405Geobacter sp. M21 chromosome, complete genomehypothetical protein2e-27120
NC_014973:2945942:295372329537232954127405Geobacter sp. M18 chromosome, complete genomehypothetical protein1e-26118
NC_012039:257962:273603273603273848246Campylobacter lari RM2100, complete genomecapsular polysaccharide biosynthesis protein1e-25114