Pre_GI: BLASTP Hits

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Query: NC_017269:303500:318295 Vibrio cholerae LMA3984-4 chromosome II, complete sequence

Start: 318295, End: 318534, Length: 240

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016945:370471:414768414768415100333Vibrio cholerae IEC224 chromosome II, complete sequencecytotoxic translational repressor of toxin-antitoxin stability system1e-32138
NC_012667:931390:970966970966971298333Vibrio cholerae MJ-1236 chromosome 2, complete genomecytotoxic translational repressor of toxin-antitoxin stability system1e-32138
NC_012583:361241:424200424200424532333Vibrio cholerae O395 chromosome chromosome II, complete sequenceCytotoxic translational repressor of toxin-antitoxin stability system1e-32138
NC_009456:787322:839410839410839742333Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein1e-32138
NC_002506:370629:414949414949415281333Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein1e-32138
NC_021150:3282702:329716432971643297478315Azotobacter vinelandii CA6, complete genomehypothetical protein6e-1166.2
NC_012560:3282704:329716632971663297480315Azotobacter vinelandii DJ, complete genomehypothetical protein6e-1166.2
NC_007760:3655433:366481036648103665160351Anaeromyxobacter dehalogenans 2CP-C, complete genomehypothetical protein1e-0858.9