Pre_GI: BLASTP Hits

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Query: NC_017269:303500:313548 Vibrio cholerae LMA3984-4 chromosome II, complete sequence

Start: 313548, End: 313862, Length: 315

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009456:787322:860902860902861297396Vibrio cholerae O395 chromosome 1, complete sequencehypothetical protein5e-54209
NC_002506:370629:391358391358391753396Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein5e-54209
NC_016945:370471:391258391258391572315Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein6e-54209
NC_012583:361241:402726402726403040315Vibrio cholerae O395 chromosome chromosome II, complete sequencehypothetical protein6e-54209
NC_002506:370629:386384386384386779396Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, completehypothetical protein2e-51200
NC_016945:370471:386284386284386598315Vibrio cholerae IEC224 chromosome II, complete sequencehypothetical protein3e-51199
NC_014965:1428902:154773715477371548099363Vibrio vulnificus MO6-24/O chromosome I, complete sequencehypothetical protein4e-50196
NC_016602:2292518:229407222940722294383312Vibrio furnissii NCTC 11218 chromosome 1, complete sequencehypothetical protein3e-22103