Pre_GI: BLASTP Hits

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Query: NC_017265:2940539:2940539 Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,

Start: 2940539, End: 2942251, Length: 1713

Host Lineage: Yersinia pestis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. It is the causative agent of plague (bubonic and pulmonary) a devastating disease which has killed millions worldwide. The organism can be transmitted from rats to humans through the bite of an infected flea or from human-to-human through the air during widespread infection. Yersinia pestis is an extremely pathogenic organism that requires very few numbers in order to cause disease, and is often lethal if left untreated. The organism is enteroinvasive, and can survive and propagate in macrophages prior to spreading systemically throughout the host. Yersinia pestis consists of three biotypes or serovars, Antiqua, Mediavalis, and Orientalis, that are associated with three major pandemics throughout human history. pMT1 encodes a protein, murine toxin, that aids rat-to-human transmission by enhancing survival of the organism in the flea midgut. Yersinia pestis also contains a PAI on the chromosome that is similar to the SPI-2 PAI from Salmonella that allows intracellular survival in the organism.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008800:3123495:3134372313437231360841713Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,D-lactate dehydrogenase01027
NC_015224:1641819:1650604165060416523161713Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,D-lactate dehydrogenase01005
NC_011894:3161289:3169579316957931713691791Methylobacterium nodulans ORS 2060, complete genomeD-lactate dehydrogenase membrane binding0716
NC_014752:1331447:1348708134870813503991692Neisseria lactamica ST-640, complete genomeD-lactate dehydrogenase0704
NC_017033:2081206:2081206208120620829691764Frateuria aurantia DSM 6220 chromosome, complete genomeFAD/FMN-dependent dehydrogenase0704
NC_017501:1352752:1357679135767913593701692Neisseria meningitidis 8013, complete genomeD-lactate dehydrogenase0701
NC_011000:2732330:2752619275261927543671749Burkholderia cenocepacia J2315 chromosome 1, complete sequenceD-lactate dehydrogenase0695
NC_016614:822715:8227158227158244211707Vibrio sp. EJY3 chromosome 2, complete sequenceD-lactate dehydrogenase0658
NC_018145:1089548:1091990109199010937141725Zymomonas mobilis subsp. mobilis ATCC 29191 chromosome, completeD-lactate dehydrogenase0642
NC_014323:4619344:4650654465065446524171764Herbaspirillum seropedicae SmR1 chromosome, complete genomeFAD-dependent D-lactate dehydrogenase0640
NC_006526:256658:2566582566582583821725Zymomonas mobilis subsp. mobilis ZM4, complete genomeFAD/FMN-containing dehydrogenase0639
NC_017262:959028:9590289590289607521725Zymomonas mobilis subsp. mobilis ATCC 10988 chromosome, completeD-lactate dehydrogenase0635
NC_010999:623489:6355316355316372101680Lactobacillus casei, complete genomeD-lactate dehydrogenase6e-161568
NC_008505:36638:3663836638383171680Lactococcus lactis subsp. cremoris SK11 plasmid 3, completeD-lactate dehydrogenase4e-160565
NC_015859:1589707:1589707158970715914221716Corynebacterium variabile DSM 44702 chromosome, complete genomeD-lactate dehydrogenase4e-147521
NC_010610:2013659:2013659201365920150561398Lactobacillus fermentum IFO 3956, complete genomeD-lactate dehydrogenase1e-124446
NC_006933:1051873:105686310568631057739877Brucella abortus biovar 1 str. 9-941 chromosome II, complete3e-39163
NC_003318:183914:197140197140197658519Brucella melitensis 16M chromosome II, complete sequenceD-LACTATE DEHYDROGENASE9e-39162
NC_013118:1109610:111471211147121115230519Brucella microti CCM 4915 chromosome 2, complete genomeD-lactate dehydrogenase1e-38161
NC_010167:1085106:109020810902081090726519Brucella suis ATCC 23445 chromosome II, complete sequencehypothetical protein1e-38161
NC_007624:1046500:105161910516191052137519Brucella melitensis biovar Abortus 2308 chromosome II, completeImmunoglobulin/major histocompatibility complex1e-38161
NC_015858:1150446:115554811555481156066519Brucella pinnipedialis B2/94 chromosome chromosome 2, completeD-lactate dehydrogenase1e-38161
NC_010740:1051000:105612110561211056639519Brucella abortus S19 chromosome 2, complete sequenceImmunoglobulin/major histocompatibility complex1e-38161