Pre_GI: BLASTP Hits

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Query: NC_017249:7917586:7964897 Bradyrhizobium japonicum USDA 6, complete genome

Start: 7964897, End: 7965517, Length: 621

Host Lineage: Bradyrhizobium japonicum; Bradyrhizobium; Bradyrhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This nitrogen-fixing bacterium develops a symbiotic relationship with the soybean plant Glycine max and is related to other N2-fixing Rhizobia which are symbiotic with legumes. The bacterium establishes itself in a root nodule which provides a protective environment for the organism to live while the bacterium provides the plant cell with nitrogen. This is an agriculturally important symbiotic relationship as it obviates the need for expensive and environmentally damaging fertilizer.Genes that code for proteins involved in root nodulation are carried on the chromosome. The production of the nodulation signal, lipochitin, is directed by genes which are turned on in the presence of plant flavonoid compounds. The bacteria are endocytosed into a cortical cell, and are enclosed within a membrane bound organelle termed the symbiosome.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010804:996837:102940810294081030340933Burkholderia multivorans ATCC 17616 chromosome 1, completeputative integrase/recombinase for integrative and conjugative element1e-49196
NC_010084:2484000:249443324944332495347915Burkholderia multivorans ATCC 17616 chromosome 1, completeintegrase family protein1e-49196
NC_015580:293803:329904329904330815912Novosphingobium sp. PP1Y, complete genomephage integrase7e-33140
NC_002678:4859111:488133848813384882276939Mesorhizobium loti MAFF303099, complete genomeintegrase/recombinase5e-24110
NC_011662:386162:420035420035420967933Thauera sp. MZ1T, complete genomeintegrase family protein2e-2099.4
NC_010524:824145:829128829128830108981Leptothrix cholodnii SP-6, complete genomeintegrase family protein1e-1686.3
NC_006513:286549:285575285575286552978Azoarcus sp. EbN1, complete genomephage-related integrase1e-1583.2
NC_006824:109735:126174126174127148975Azoarcus sp. EbN1 plasmid 2, complete sequenceputative integrase1e-1583.2
NC_010338:2136193:215249321524932153434942Caulobacter sp. K31, complete genomeintegrase family protein1e-1583.2
NC_010524:824145:8388328388328398331002Leptothrix cholodnii SP-6, complete genomeintegrase family protein2e-1582
NC_010623:1961685:197758719775871978537951Burkholderia phymatum STM815 chromosome 2, complete sequenceintegrase family protein7e-1270.5
NC_015942:2316354:232155623215562322533978Acidithiobacillus ferrivorans SS3 chromosome, complete genomeintegrase family protein2e-1065.9
NC_010571:5650806:565354456535445654536993Opitutus terrae PB90-1, complete genomeintegrase family protein7e-1063.9
NC_003155:622993:642610642610643092483Streptomyces avermitilis MA-4680, complete genomeintegrase/recombinase1e-0962.8
NC_011761:2131911:214539821453982146339942Acidithiobacillus ferrooxidans ATCC 23270 chromosome, completesite-specific recombinase, phage integrase family5e-0960.8
NC_011206:2019577:203343920334392034380942Acidithiobacillus ferrooxidans ATCC 53993, complete genomeintegrase family protein5e-0960.8
NC_010170:1103224:110882711088271109822996Bordetella petrii, complete genomeintegrase/recombinase3e-0755.5
NC_010170:1324758:136654913665491367544996Bordetella petrii, complete genomeintegrase/recombinase3e-0755.5
NC_010170:1498253:150698715069871507982996Bordetella petrii, complete genomeintegrase/recombinase3e-0755.5
NC_008726:6335961:633503263350326335964933Mycobacterium vanbaalenii PYR-1, complete genomephage integrase family protein4e-0754.7
NC_016626:1699500:170405317040531705045993Burkholderia sp. YI23 plasmid byi_1p, complete sequencephage integrase5e-0651.2
NC_016589:183432:197647197647198639993Burkholderia sp. YI23 chromosome 1, complete sequencephage integrase5e-0651.2
NC_010625:1602191:160404216040421605019978Burkholderia phymatum STM815 plasmid pBPHY01, complete sequenceintegrase family protein8e-0650.4